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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_015466
Query referenceOH1004
LocationChr03:72853450-72858332 (+)
DescriptionSimilar to TRS120: Trafficking protein particle complex II-specific subunit 120 homolog (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_015466 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g11040 Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells.
Tethering factors required for cytokinesis in Arabidopsis.2010 · DOI: 10.1104/pp.110.154286
A specific role for Arabidopsis TRAPPII in post-Golgi trafficking that is crucial for cytokinesis and cell polarity.2011 · DOI: 10.1111/j.1365-313x.2011.04681.x
VAN4 encodes a putative TRS120 that is required for normal cell growth and vein development in Arabidopsis.2014 · DOI: 10.1093/pcp/pcu012

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0502200 Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000911cytokinesis by cell plate formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000919cell plate assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006888endoplasmic reticulum to Golgi vesicle-mediated transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.304; coverage=70.599; evalue=4.64e-37; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006901vesicle coatingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.304; coverage=70.599; evalue=4.64e-37; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.036; coverage=69.526; evalue=5.44e-39; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0099022vesicle tetheringBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.304; coverage=70.599; evalue=4.64e-37; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.304; coverage=70.599; evalue=4.64e-37; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005769early endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.036; coverage=69.526; evalue=5.44e-39; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.485; coverage=70.777; evalue=2.9e-36; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030008TRAPP complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.304; coverage=70.599; evalue=4.64e-37; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G11040KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.878; coverage=105.719; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbta:533451KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.036; coverage=69.526; evalue=5.44e-39UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0502200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.201; coverage=107.328; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:83696KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.485; coverage=70.777; evalue=2.9e-36UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:76510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.304; coverage=70.599; evalue=4.64e-37UniProtKB/Swiss-Prot DAT 2026 current_release