Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_015315 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:68438052-68438472 (+) |
| Description | Similar to KINB3: SNF1-related protein kinase regulatory subunit beta-3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_015315 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g28060 |
Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | No verified direct reference in this release |
At4g16360 |
Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | No verified direct reference in this release |
At5g21170 |
Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006633 | fatty acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.525; coverage=83.898; evalue=3.21e-28; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031669 | cellular response to nutrient levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042128 | nitrate assimilation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.525; coverage=83.898; evalue=3.21e-28; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043562 | cellular response to nitrogen levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.939; coverage=83.051; evalue=5.6e-22; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045859 | regulation of protein kinase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.525; coverage=83.898; evalue=3.21e-28; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120162 | positive regulation of cold-induced thermogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=ISS:YuBioLab | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005788 | endoplasmic reticulum lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=66.102; evalue=3.15e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=66.102; evalue=3.15e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.525; coverage=83.898; evalue=3.21e-28; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005952 | cAMP-dependent protein kinase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009569 | chloroplast starch grain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016324 | apical plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031588 | nucleotide-activated protein kinase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.525; coverage=83.898; evalue=3.21e-28; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019887 | protein kinase regulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901982 | maltose binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G28060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.069; coverage=98.305; evalue=7.4e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G16360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.525; coverage=83.898; evalue=3.21e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G21170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.939; coverage=83.051; evalue=5.6e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5565 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=66.102; evalue=3.15e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:64562 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.154; coverage=66.102; evalue=2.24e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |