Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_014917 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:59604927-59606217 (-) |
| Description | Similar to TOP6A: DNA topoisomerase 6 subunit A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014917 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g02820 |
Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0284800 |
Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. | No verified direct reference in this release |
UniProt: A2XFC1 |
Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. | No verified direct reference in this release |
Os12g0622500 |
Required for meiotic recombination. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000706 | meiotic DNA double-strand break processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006260 | DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.238; coverage=65.831; evalue=1.52e-11; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006265 | DNA topological change | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.746; coverage=36.991; evalue=7.93e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042138 | meiotic DNA double-strand break formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090628 | plant epidermal cell fate specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000228 | nuclear chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.238; coverage=65.831; evalue=1.52e-11; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009330 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.746; coverage=36.991; evalue=7.93e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030957 | Tat protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.746; coverage=36.991; evalue=7.93e-11; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.746; coverage=36.991; evalue=7.93e-11; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.746; coverage=36.991; evalue=7.93e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G02820 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.096; coverage=88.088; evalue=5.45e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0284800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.452; coverage=88.088; evalue=7.98e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0622500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.746; coverage=36.991; evalue=7.93e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4332468 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.452; coverage=88.088; evalue=7.98e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pfu:PF1578 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.238; coverage=65.831; evalue=1.52e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |