Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_011844`
Query reference	OH1004
Location	Chr03:1374664-1382757 (-)
Description	Similar to DHFS: Dihydrofolate synthetase (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_011844 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 20 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g41480`	Conversion of folates to polyglutamate derivatives, including tetrahydrofolate.	Tetrahydrofolate biosynthesis in plants: molecular and functional characterization of dihydrofolate synthetase and three isoforms of folylpolyglutamate synthetase in Arabidopsis thaliana.2001 · DOI: 10.1073/pnas.261585098 The GLOBULAR ARREST1 gene, which is involved in the biosynthesis of folates, is essential for embryogenesis in Arabidopsis thaliana.2003 · DOI: 10.1046/j.1365-313x.2003.01621.x
`At4g02960`	Retrovirus-related Pol polyprotein from transposon RE2.	No verified direct reference in this release
`UniProt: Q94HW2`	Retrovirus-related Pol polyprotein from transposon RE1.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006281	DNA repair	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.133; coverage=32.828; evalue=6.75e-73; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006508	proteolysis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006730	one-carbon metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009396	folic acid-containing compound biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009793	embryo development ending in seed dormancy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015074	DNA integration	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046654	tetrahydrofolate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071897	DNA biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.133; coverage=32.828; evalue=6.75e-73; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005759	mitochondrial matrix	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042575	DNA polymerase complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.133; coverage=32.828; evalue=6.75e-73; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003676	nucleic acid binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003964	RNA-directed DNA polymerase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004190	aspartic-type endopeptidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004326	tetrahydrofolylpolyglutamate synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004519	endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.152; coverage=54.384; evalue=2.45e-143; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008841	dihydrofolate synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G41480	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.071; coverage=29.532; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release