Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010469 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:147198920-147206815 (-) |
| Description | Similar to JHS1: DNA replication ATP-dependent helicase/nuclease JHS1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010469 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 41 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g08840 |
Essential protein required during embryogenesis. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000076 | DNA replication checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000729 | DNA double-strand break processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006260 | DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006264 | mitochondrial DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006284 | base-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010073 | meristem maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015880 | coenzyme A transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.206; coverage=72.827; evalue=3.2e-160; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032201 | telomere maintenance via semi-conservative replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.206; coverage=72.827; evalue=3.2e-160; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033567 | DNA replication, Okazaki fragment processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043137 | DNA replication, removal of RNA primer | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043504 | mitochondrial DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045002 | double-strand break repair via single-strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=IDA:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045740 | positive regulation of DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071932 | replication fork reversal | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902990 | mitotic telomere maintenance via semi-conservative replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990559 | mitochondrial coenzyme A transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.206; coverage=72.827; evalue=3.2e-160; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.206; coverage=72.827; evalue=3.2e-160; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042645 | mitochondrial nucleoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003678 | DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004518 | nuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015228 | coenzyme A transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.206; coverage=72.827; evalue=3.2e-160; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017108 | 5'-flap endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017116 | single-stranded DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022857 | transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.206; coverage=72.827; evalue=3.2e-160; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033892 | deoxyribonuclease (pyrimidine dimer) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043139 | 5'-3' DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051539 | 4 iron, 4 sulfur cluster binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G08840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.453; coverage=100.877; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:423688 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.2; coverage=73.265; evalue=2.85e-159 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:327762 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.449; coverage=74.215; evalue=8.24e-162 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:378492 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.091; coverage=72.023; evalue=7.93e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release |