Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010215 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:142356223-142361066 (+) |
| Description | Similar to ARPC1B: Actin-related protein 2/3 complex subunit 1B (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010215 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g31300 |
Functions as a component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | No verified direct reference in this release |
At2g30910 |
Functions as a component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006887 | exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006909 | phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007015 | actin filament organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030041 | actin filament polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=TAS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034314 | Arp2/3 complex-mediated actin nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045010 | actin nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=TAS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001891 | phagocytic cup | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005885 | Arp2/3 protein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005905 | clathrin-coated pit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005938 | cell cortex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030175 | filopodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030670 | phagocytic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030864 | cortical actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031012 | extracellular matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=HDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031143 | pseudopodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031252 | cell leading edge | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.593; coverage=69.118; evalue=9.03e-84; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042995 | cell projection | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045335 | phagocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051015 | actin filament binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G30910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.595; coverage=70.588; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G31300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.595; coverage=70.588; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0277825 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.515; coverage=70.168; evalue=1.57e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:56443 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.593; coverage=69.118; evalue=9.03e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:81824 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.289; coverage=69.118; evalue=6.11e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release |