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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_009292
Query referenceOH1004
LocationChr02:122097493-122098976 (-)
DescriptionSimilar to KCS2: 3-ketoacyl-CoA synthase 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009292 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g04220 Mediates the synthesis of VLCFAs from 22 to 26 carbons in length (e.g. C22, C24, C26).
Specific and differential inhibition of very-long-chain fatty acid elongases from Arabidopsis thaliana by different herbicides.2004 · DOI: 10.1073/pnas.0404600101
The DAISY gene from Arabidopsis encodes a fatty acid elongase condensing enzyme involved in the biosynthesis of aliphatic suberin in roots and the chalaza-micropyle region of seeds.2009 · DOI: 10.1111/j.1365-313x.2008.03674.x
Two Arabidopsis 3-ketoacyl CoA synthase genes, KCS20 and KCS2/DAISY, are functionally redundant in cuticular wax and root suberin biosynthesis, but differentially controlled by osmotic stress.2009 · DOI: 10.1111/j.1365-313x.2009.03973.x
At2g26640 Active on both saturated and mono-unsaturated acyl chains C16 to C20.
Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases.2006 · DOI: 10.1016/j.bbrc.2006.05.162
At5g43760 Mediates the synthesis of VLCFAs from 22 to 26 carbons in length (e.g. C22, C24, C26).
Specific and differential inhibition of very-long-chain fatty acid elongases from Arabidopsis thaliana by different herbicides.2004 · DOI: 10.1073/pnas.0404600101
At4g34510 Active on saturated acyl-CoAs up to C22.
Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases.2006 · DOI: 10.1016/j.bbrc.2006.05.162
At1g19440 3-ketoacyl-CoA synthase 4. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000038very long-chain fatty acid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.455; coverage=94.218; evalue=1.14e-146; UniProt GO evidence=IMP:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006633fatty acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.152; coverage=92.934; evalue=2.31e-155; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009416response to light stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.152; coverage=92.934; evalue=2.31e-155; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009611response to woundingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010345suberin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030497fatty acid elongationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.455; coverage=94.218; evalue=1.14e-146; UniProt GO evidence=IMP:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0160062cutin-based cuticle developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.113; coverage=92.719; evalue=3.46e-146; UniProt GO evidence=IDA:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009922fatty acid elongase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G04220KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.002; coverage=96.574; evalue=2.31e-157UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G19440KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.113; coverage=92.719; evalue=3.46e-146UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G26640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.152; coverage=92.934; evalue=2.31e-155UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G34510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.455; coverage=94.218; evalue=1.14e-146UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G43760KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.231; coverage=97.43; evalue=2.02e-154UniProtKB/Swiss-Prot DAT 2026 current_release