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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_000563
Query referenceOH1004
LocationChr01:10369980-10372103 (+)
DescriptionSimilar to SMO2-2: Methylsterol monooxygenase 2-2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000563 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g07420 Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the second methyl group at the C-4 position.
Functional identification of sterol-4alpha-methyl oxidase cDNAs from Arabidopsis thaliana by complementation of a yeast erg25 mutant lacking sterol-4alpha-methyl oxidation.2001 · DOI: 10.1016/s0014-5793(01)03002-2
Sterol Methyl Oxidases Affect Embryo Development via Auxin-Associated Mechanisms.2016 · DOI: 10.1104/pp.15.01814
At2g29390 Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the second methyl group at the C-4 position.
Sterol Methyl Oxidases Affect Embryo Development via Auxin-Associated Mechanisms.2016 · DOI: 10.1104/pp.15.01814

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0101500 Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. No verified direct reference in this release
UniProt: B8B6I2 Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. No verified direct reference in this release
Os11g0707600 Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0008610lipid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.923; coverage=97.015; evalue=2.62e-149; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016126sterol biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00800654-alpha-methyl-delta7-sterol oxidationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.37; coverage=100.746; evalue=3.04e-167; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000254C-4 methylsterol oxidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005506iron ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016491oxidoreductase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.923; coverage=97.015; evalue=2.62e-149; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071771aldehyde oxygenase (deformylating) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.923; coverage=97.015; evalue=2.62e-149; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:010217724-methylenelophenol methyl oxidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G07420KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.09; coverage=100.0; evalue=3.83e-170UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G29390KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.37; coverage=100.746; evalue=3.04e-167UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0101500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.923; coverage=97.015; evalue=2.62e-149UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os11g0707600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.692; coverage=97.015; evalue=2.35e-147UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4342171KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.923; coverage=97.015; evalue=2.62e-149UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4351226KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.692; coverage=97.015; evalue=2.35e-147UniProtKB/Swiss-Prot DAT 2026 current_release