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Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
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TF Prediction Compatibility Route

Compatibility route retained; the canonical function is provided by the TFBS page.

Examples TkA03G584840 LXL04_011367

Dual-reference IDs

Input ID TkA08G003540
TK1151 ID TkA08G003540
OH-1004 ID LXL04_021575

Evidence boundary: this page reports TF-family candidates from Pfam-A/HMMER domain rules on TK1151 representative proteins; motif support and target counts come from candidate promoter motif scans and are not validated regulation.

TF Family Summary

Current scope: TK1151; promoter=2500 bp; TF classification records=1701

MYB: 254 AP2/ERF: 177 bHLH: 113 FAR1: 96 NAC: 92 Homeobox: 87 MADS: 74 WRKY: 71 GRAS: 68 bZIP: 63 B3: 62 LBD: 58 ARF: 55 Trihelix: 55 ARR-B: 49 G2-like: 40 C3H: 38 Dof: 38 TCP: 36 C2H2: 34 GATA: 33 HSF: 24 SBP: 22 E2F/DP: 17 ZF-HD: 14 NF-YA: 9 YABBY: 8 CAMTA: 5 EIL: 5 LFY: 4

Candidate Results

Download current result

Total 3; showing 1–3. Download includes all matching records.

Gene IDProteinFamilyPfamDescriptionE-valueConfidenceMotif supportCandidate targetsSource
TkA08G003540 TkA08G003540 Dof PF02701 Zn_ribbon_Dof 1.3e-33 High family_shared_motif_candidate 40335 TK1151 representative proteins + Pfam/HMMER domain rules + JASPAR/FIMO promoter scan + formal_gene_id_crosswalk
TkA06G476300 TkA06G476300 Dof PF02701 Zn_ribbon_Dof 3.8e-33 High family_shared_motif_candidate 40335 TK1151 representative proteins + Pfam/HMMER domain rules + JASPAR/FIMO promoter scan + formal_gene_id_crosswalk
TkA05G407520 TkA05G407520 Dof PF02701 Zn_ribbon_Dof 1.3e-32 High family_shared_motif_candidate 40335 TK1151 representative proteins + Pfam/HMMER domain rules + JASPAR/FIMO promoter scan + formal_gene_id_crosswalk