Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00269
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 222
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00269The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00269 |
Chr06:12242939-16849169 | Chr05:110880707-115345701 | mixed | 222 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 222 · Showing 201–222 · Page 2/2
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G061460 | LXL04_025406 | JCVI_TKOH_00269 | 98.8 | 80.124 / 100.0 | Complex |
TkA06G061540 | LXL04_025405 | JCVI_TKOH_00269 | 95.6 | 100.0 / 90.132 | Review |
TkA06G061570 | LXL04_025404 | JCVI_TKOH_00269 | 99.3 | 100.0 / 100.0 | Strict |
TkA06G061590 | LXL04_025403 | JCVI_TKOH_00269 | 100.0 | 98.77 / 63.089 | Review |
TkA06G061600 | LXL04_025403 | JCVI_TKOH_00269 | 92.9 | 64.706 / 25.654 | Complex |
TkA06G061620 | LXL04_025402 | JCVI_TKOH_00269 | 100.0 | 82.787 / 41.057 | Complex |
TkA06G061630 | LXL04_025410 | JCVI_TKOH_00269 | 53.8 | 84.49 / 41.412 | Complex |
TkA06G061640 | LXL04_025401 | JCVI_TKOH_00269 | 100.0 | 99.467 / 91.198 | Strict |
TkA06G061670 | LXL04_025400 | JCVI_TKOH_00269 | 90.8 | 100.0 / 62.201 | Review |
TkA06G061720 | LXL04_025398 | JCVI_TKOH_00269 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G061780 | LXL04_025397 | JCVI_TKOH_00269 | 99.8 | 98.168 / 67.28 | Review |
TkA06G061800 | LXL04_025396 | JCVI_TKOH_00269 | 98.9 | 80.531 / 63.636 | Review |
TkA06G061810 | LXL04_025395 | JCVI_TKOH_00269 | 100.0 | 77.512 / 100.0 | Probable |
TkA06G061840 | LXL04_025394 | JCVI_TKOH_00269 | 82.7 | 94.872 / 39.778 | Complex |
TkA06G061910 | LXL04_025393 | JCVI_TKOH_00269 | 99.0 | 98.748 / 96.73 | Strict |
TkA06G062110 | LXL04_025389 | JCVI_TKOH_00269 | 99.0 | 76.515 / 36.727 | Complex |
TkA06G062120 | LXL04_025388 | JCVI_TKOH_00269 | 99.2 | 98.507 / 79.518 | Complex |
TkA06G062220 | LXL04_025387 | JCVI_TKOH_00269 | 97.8 | 67.883 / 34.191 | Complex |
TkA06G062320 | LXL04_025385 | JCVI_TKOH_00269 | 99.7 | 97.118 / 53.155 | Review |
TkA06G062370 | LXL04_025383 | JCVI_TKOH_00269 | 99.8 | 100.0 / 100.0 | Strict |
TkA06G062380 | LXL04_025382 | JCVI_TKOH_00269 | 100.0 | 100.0 / 71.088 | Complex |
TkA06G062390 | LXL04_025380 | JCVI_TKOH_00269 | 95.3 | 33.077 / 28.667 | Complex |