同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00267
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 39
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00267

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00267 Chr06 11087341-11637881 Chr05 116512344-117027565 - High 39 anchors
Chr06 11087341-11637881 Chr05 116512344-117027565 JCVI_TKOH_00267 · 39 gene pairs TkA06G041010 | LXL04_025802 | 99.7% | sequence_supported_annotation_or_model_conflict | Review TkA06G041020 | LXL04_025801 | 93.5% | multi_source_to_OH1004 | Complex TkA06G041030 | LXL04_025800 | 99.6% | multi_source_to_OH1004 | Complex TkA06G041050 | LXL04_025799 | 99.5% | RBH_sequence_supported | Probable TkA06G041060 | LXL04_025798 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA06G041070 | LXL04_025798 | 90.7% | multi_source_to_OH1004 | Complex TkA06G041110 | LXL04_025797 | 98.0% | multi_source_to_OH1004 | Complex TkA06G041130 | LXL04_025796 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA06G041230 | LXL04_025791 | 99.4% | multi_source_to_OH1004 | Complex TkA06G041260 | LXL04_025790 | 100.0% | multi_source_to_OH1004 | Complex TkA06G041350 | LXL04_025787 | 96.7% | sequence_supported_annotation_or_model_conflict | Review TkA06G041430 | LXL04_025785 | 97.4% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00267 Chr06:11087341-11637881 Chr05:116512344-117027565 - 39 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 39 · 当前范围 1–39 · 页码 1/1

TkA06G041010 → LXL04_025802
99.7%
TkA06G041020 → LXL04_025801
93.5%
TkA06G041030 → LXL04_025800
99.6%
TkA06G041050 → LXL04_025799
99.5%
TkA06G041060 → LXL04_025798
100.0%
TkA06G041070 → LXL04_025798
90.7%
TkA06G041110 → LXL04_025797
98.0%
TkA06G041130 → LXL04_025796
100.0%
TkA06G041230 → LXL04_025791
99.4%
TkA06G041260 → LXL04_025790
100.0%
TkA06G041350 → LXL04_025787
96.7%
TkA06G041430 → LXL04_025785
97.4%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA06G041010LXL04_025802JCVI_TKOH_0026799.7100.0 / 54.943待复核
TkA06G041020LXL04_025801JCVI_TKOH_0026793.5100.0 / 52.991Complex
TkA06G041030LXL04_025800JCVI_TKOH_0026799.6100.0 / 100.0Complex
TkA06G041050LXL04_025799JCVI_TKOH_0026799.575.763 / 83.73Probable
TkA06G041060LXL04_025798JCVI_TKOH_00267100.0100.0 / 31.671待复核
TkA06G041070LXL04_025798JCVI_TKOH_0026790.796.957 / 54.64Complex
TkA06G041110LXL04_025797JCVI_TKOH_0026798.0100.0 / 90.775Complex
TkA06G041130LXL04_025796JCVI_TKOH_00267100.0100.0 / 100.0Strict
TkA06G041230LXL04_025791JCVI_TKOH_0026799.496.328 / 94.46Complex
TkA06G041260LXL04_025790JCVI_TKOH_00267100.096.399 / 96.399Complex
TkA06G041350LXL04_025787JCVI_TKOH_0026796.7100.0 / 49.793待复核
TkA06G041430LXL04_025785JCVI_TKOH_0026797.4100.0 / 100.0Strict
TkA06G041530LXL04_025782JCVI_TKOH_0026798.498.814 / 39.839待复核
TkA06G041560LXL04_025781JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G041570LXL04_025780JCVI_TKOH_00267100.0100.0 / 100.0待复核
TkA06G041590LXL04_025779JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G041600LXL04_025778JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G041610LXL04_025777JCVI_TKOH_0026799.896.789 / 27.818待复核
TkA06G041620LXL04_025777JCVI_TKOH_0026796.693.367 / 36.585待复核
TkA06G041630LXL04_025777JCVI_TKOH_0026784.995.5 / 29.334Complex
TkA06G041640LXL04_025776JCVI_TKOH_0026789.5100.0 / 100.0Complex
TkA06G041680LXL04_025774JCVI_TKOH_00267100.0100.0 / 100.0待复核
TkA06G041810LXL04_025773JCVI_TKOH_0026799.898.416 / 87.021Complex
TkA06G041840LXL04_025772JCVI_TKOH_0026796.4100.0 / 84.615待复核
TkA06G041850LXL04_025771JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G041900LXL04_025770JCVI_TKOH_0026786.4100.0 / 40.687Complex
TkA06G041920LXL04_025769JCVI_TKOH_0026799.6100.0 / 100.0Strict
TkA06G042170LXL04_025768JCVI_TKOH_0026798.452.991 / 88.571待复核
TkA06G042180LXL04_025767JCVI_TKOH_0026798.997.789 / 76.619Complex
TkA06G042190LXL04_025764JCVI_TKOH_00267100.0100.0 / 97.674Complex
TkA06G042220LXL04_025763JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G042340LXL04_025761JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G042380LXL04_025760JCVI_TKOH_00267100.096.532 / 59.857待复核
TkA06G042450LXL04_025756JCVI_TKOH_00267100.0100.0 / 100.0待复核
TkA06G042570LXL04_025754JCVI_TKOH_0026799.6100.0 / 100.0Complex
TkA06G042890LXL04_025752JCVI_TKOH_0026798.8100.0 / 100.0待复核
TkA06G042930LXL04_025751JCVI_TKOH_00267100.0100.0 / 100.0Complex
TkA06G042940LXL04_025749JCVI_TKOH_0026796.4100.0 / 100.0Complex
TkA06G042970LXL04_025747JCVI_TKOH_00267100.0100.0 / 100.0待复核