Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00281
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 11
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00281The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00281 |
Chr06:82101657-84273454 | Chr05:37362990-40245622 | mixed | 11 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 11 · Showing 1–11 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G328890 | LXL04_023397 | JCVI_TKOH_00281 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G328910 | LXL04_023398 | JCVI_TKOH_00281 | 98.2 | 100.0 / 100.0 | Complex |
TkA06G332650 | LXL04_023406 | JCVI_TKOH_00281 | 97.8 | 93.878 / 61.662 | Review |
TkA06G335080 | LXL04_023414 | JCVI_TKOH_00281 | 92.7 | 94.783 / 64.118 | Complex |
TkA06G337030 | LXL04_023419 | JCVI_TKOH_00281 | 97.7 | 100.0 / 100.0 | Strict |
TkA06G337100 | LXL04_023420 | JCVI_TKOH_00281 | 89.7 | 100.0 / 100.0 | Review |
TkA06G337120 | LXL04_023421 | JCVI_TKOH_00281 | 99.4 | 100.0 / 39.777 | Review |
TkA06G337660 | LXL04_023427 | JCVI_TKOH_00281 | 99.1 | 100.0 / 100.0 | Strict |
TkA06G338090 | LXL04_023428 | JCVI_TKOH_00281 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G338100 | LXL04_023429 | JCVI_TKOH_00281 | 99.6 | 100.0 / 100.0 | Strict |
TkA06G338110 | LXL04_023430 | JCVI_TKOH_00281 | 100.0 | 100.0 / 100.0 | Strict |