Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00123
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 22
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00123The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00123 |
Chr03:7760774-8433443 | Chr02:8947218-9565832 | - | 22 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 22 · Showing 1–22 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA03G028980 | LXL04_006389 | JCVI_TKOH_00123 | 100.0 | 100.0 / 78.125 | Probable |
TkA03G029110 | LXL04_006388 | JCVI_TKOH_00123 | 99.8 | 100.0 / 97.841 | Strict |
TkA03G029190 | LXL04_006387 | JCVI_TKOH_00123 | 98.0 | 100.0 / 100.0 | Strict |
TkA03G030070 | LXL04_006383 | JCVI_TKOH_00123 | 99.9 | 100.0 / 77.971 | Probable |
TkA03G030090 | LXL04_006382 | JCVI_TKOH_00123 | 98.5 | 100.0 / 100.0 | Review |
TkA03G030130 | LXL04_006381 | JCVI_TKOH_00123 | 100.0 | 100.0 / 56.346 | Review |
TkA03G030140 | LXL04_006383 | JCVI_TKOH_00123 | 99.8 | 100.0 / 48.156 | Review |
TkA03G030160 | LXL04_006382 | JCVI_TKOH_00123 | 98.5 | 100.0 / 100.0 | Review |
TkA03G030200 | LXL04_006381 | JCVI_TKOH_00123 | 100.0 | 100.0 / 100.0 | Complex |
TkA03G030350 | LXL04_006379 | JCVI_TKOH_00123 | 97.9 | 100.0 / 100.0 | Strict |
TkA03G030520 | LXL04_006377 | JCVI_TKOH_00123 | 79.3 | 100.0 / 100.0 | Review |
TkA03G030650 | LXL04_006375 | JCVI_TKOH_00123 | 100.0 | 100.0 / 100.0 | Strict |
TkA03G030690 | LXL04_006374 | JCVI_TKOH_00123 | 100.0 | 100.0 / 100.0 | Complex |
TkA03G030760 | LXL04_006373 | JCVI_TKOH_00123 | 98.8 | 96.142 / 49.923 | Review |
TkA03G030920 | LXL04_006373 | JCVI_TKOH_00123 | 98.0 | 94.444 / 15.716 | Review |
TkA03G031000 | LXL04_006370 | JCVI_TKOH_00123 | 85.3 | 95.565 / 51.535 | Review |
TkA03G031080 | LXL04_006368 | JCVI_TKOH_00123 | 99.1 | 79.71 / 43.307 | Review |
TkA03G031360 | LXL04_006366 | JCVI_TKOH_00123 | 99.0 | 100.0 / 39.009 | Review |
TkA03G031380 | LXL04_006366 | JCVI_TKOH_00123 | 100.0 | 100.0 / 24.651 | Review |
TkA03G031390 | LXL04_006365 | JCVI_TKOH_00123 | 100.0 | 100.0 / 88.247 | Strict |
TkA03G031400 | LXL04_006365 | JCVI_TKOH_00123 | 99.1 | 93.548 / 11.554 | Review |
TkA03G031420 | LXL04_006364 | JCVI_TKOH_00123 | 93.7 | 100.0 / 91.931 | Probable |