Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00307

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 312

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00307

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00307 Chr07 57689465-78240712 Chr06 70648111-89578874 mixed High 112 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00307`	Chr07:57689465-78240712	Chr06:70648111-89578874	mixed	312	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 312 · Showing 201–312 · Page 2/2

Previous Download All Anchors TSV

TkA07G286760 → LXL04_029221

98.5%

TkA07G286780 → LXL04_029222

99.4%

TkA07G287600 → LXL04_029225

100.0%

TkA07G287670 → LXL04_029226

98.8%

TkA07G287680 → LXL04_029227

95.8%

TkA07G287700 → LXL04_029229

97.2%

TkA07G287780 → LXL04_029231

99.2%

TkA07G287790 → LXL04_029232

99.7%

TkA07G290210 → LXL04_029236

96.0%

TkA07G290270 → LXL04_029236

74.1%

TkA07G290630 → LXL04_029237

100.0%

TkA07G290670 → LXL04_029241

99.8%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA07G286760`	`LXL04_029221`	`JCVI_TKOH_00307`	98.5	99.275 / 54.365	Review
`TkA07G286780`	`LXL04_029222`	`JCVI_TKOH_00307`	99.4	100.0 / 100.0	Strict
`TkA07G287600`	`LXL04_029225`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G287670`	`LXL04_029226`	`JCVI_TKOH_00307`	98.8	100.0 / 100.0	Strict
`TkA07G287680`	`LXL04_029227`	`JCVI_TKOH_00307`	95.8	99.404 / 96.614	Strict
`TkA07G287700`	`LXL04_029229`	`JCVI_TKOH_00307`	97.2	100.0 / 100.0	Strict
`TkA07G287780`	`LXL04_029231`	`JCVI_TKOH_00307`	99.2	100.0 / 100.0	Complex
`TkA07G287790`	`LXL04_029232`	`JCVI_TKOH_00307`	99.7	100.0 / 100.0	Strict
`TkA07G290210`	`LXL04_029236`	`JCVI_TKOH_00307`	96.0	99.554 / 45.51	Review
`TkA07G290270`	`LXL04_029236`	`JCVI_TKOH_00307`	74.1	90.874 / 93.061	Complex
`TkA07G290630`	`LXL04_029237`	`JCVI_TKOH_00307`	100.0	99.401 / 99.401	Complex
`TkA07G290670`	`LXL04_029241`	`JCVI_TKOH_00307`	99.8	100.0 / 100.0	Strict
`TkA07G290780`	`LXL04_029242`	`JCVI_TKOH_00307`	100.0	32.966 / 30.638	Review
`TkA07G290790`	`LXL04_029243`	`JCVI_TKOH_00307`	100.0	44.944 / 100.0	Review
`TkA07G291010`	`LXL04_029247`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G291260`	`LXL04_029249`	`JCVI_TKOH_00307`	94.3	73.95 / 38.428	Complex
`TkA07G291290`	`LXL04_029252`	`JCVI_TKOH_00307`	70.0	99.559 / 49.667	Complex
`TkA07G291310`	`LXL04_029248`	`JCVI_TKOH_00307`	100.0	90.345 / 21.475	Review
`TkA07G291320`	`LXL04_029248`	`JCVI_TKOH_00307`	75.1	73.404 / 41.475	Complex
`TkA07G291480`	`LXL04_029249`	`JCVI_TKOH_00307`	100.0	94.04 / 62.009	Review
`TkA07G292140`	`LXL04_029252`	`JCVI_TKOH_00307`	94.6	97.929 / 77.605	Complex
`TkA07G292150`	`LXL04_029253`	`JCVI_TKOH_00307`	99.5	100.0 / 94.322	Review
`TkA07G292640`	`LXL04_029254`	`JCVI_TKOH_00307`	100.0	99.143 / 54.923	Review
`TkA07G292890`	`LXL04_029258`	`JCVI_TKOH_00307`	78.0	91.729 / 83.444	Review
`TkA07G292990`	`LXL04_029260`	`JCVI_TKOH_00307`	98.1	96.657 / 63.095	Review
`TkA07G293500`	`LXL04_029264`	`JCVI_TKOH_00307`	97.5	99.267 / 100.0	Strict
`TkA07G294120`	`LXL04_029265`	`JCVI_TKOH_00307`	99.8	100.0 / 93.156	Complex
`TkA07G294800`	`LXL04_029271`	`JCVI_TKOH_00307`	76.1	100.0 / 100.0	Complex
`TkA07G294910`	`LXL04_029272`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Review
`TkA07G295220`	`LXL04_029271`	`JCVI_TKOH_00307`	97.9	98.258 / 57.085	Review
`TkA07G295430`	`LXL04_029272`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Review
`TkA07G296010`	`LXL04_029277`	`JCVI_TKOH_00307`	100.0	40.0 / 58.491	Review
`TkA07G296250`	`LXL04_029279`	`JCVI_TKOH_00307`	86.9	100.0 / 100.0	Review
`TkA07G296330`	`LXL04_029280`	`JCVI_TKOH_00307`	70.6	100.0 / 98.266	Complex
`TkA07G296970`	`LXL04_029285`	`JCVI_TKOH_00307`	99.0	100.0 / 14.019	Review
`TkA07G297020`	`LXL04_029285`	`JCVI_TKOH_00307`	100.0	100.0 / 22.964	Review
`TkA07G297130`	`LXL04_029287`	`JCVI_TKOH_00307`	99.3	90.099 / 100.0	Strict
`TkA07G297150`	`LXL04_029288`	`JCVI_TKOH_00307`	96.0	100.0 / 100.0	Complex
`TkA07G297290`	`LXL04_029289`	`JCVI_TKOH_00307`	97.1	99.842 / 86.401	Strict
`TkA07G297590`	`LXL04_029291`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G297600`	`LXL04_029292`	`JCVI_TKOH_00307`	99.5	100.0 / 100.0	Strict
`TkA07G297790`	`LXL04_029293`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G297850`	`LXL04_029294`	`JCVI_TKOH_00307`	92.4	100.0 / 100.0	Probable
`TkA07G297870`	`LXL04_029295`	`JCVI_TKOH_00307`	80.1	100.0 / 100.0	Complex
`TkA07G297880`	`LXL04_029296`	`JCVI_TKOH_00307`	97.3	100.0 / 100.0	Strict
`TkA07G298500`	`LXL04_029300`	`JCVI_TKOH_00307`	93.5	88.757 / 34.881	Review
`TkA07G299740`	`LXL04_029306`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G299770`	`LXL04_029307`	`JCVI_TKOH_00307`	99.2	100.0 / 100.0	Review
`TkA07G299920`	`LXL04_029308`	`JCVI_TKOH_00307`	90.5	100.0 / 100.0	Complex
`TkA07G300060`	`LXL04_029309`	`JCVI_TKOH_00307`	99.3	87.975 / 60.435	Review
`TkA07G300180`	`LXL04_029310`	`JCVI_TKOH_00307`	47.7	84.127 / 23.439	Complex
`TkA07G300450`	`LXL04_029311`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Complex
`TkA07G300690`	`LXL04_029314`	`JCVI_TKOH_00307`	84.8	100.0 / 85.294	Complex
`TkA07G300830`	`LXL04_029314`	`JCVI_TKOH_00307`	86.2	100.0 / 85.294	Complex
`TkA07G301600`	`LXL04_029314`	`JCVI_TKOH_00307`	86.2	100.0 / 85.294	Complex
`TkA07G301680`	`LXL04_029314`	`JCVI_TKOH_00307`	86.2	100.0 / 85.294	Complex
`TkA07G301810`	`LXL04_029314`	`JCVI_TKOH_00307`	84.8	100.0 / 85.294	Complex
`TkA07G301820`	`LXL04_029320`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G302950`	`LXL04_029323`	`JCVI_TKOH_00307`	68.3	100.0 / 91.195	Review
`TkA07G302980`	`LXL04_029327`	`JCVI_TKOH_00307`	99.9	100.0 / 100.0	Strict
`TkA07G303310`	`LXL04_029328`	`JCVI_TKOH_00307`	99.6	100.0 / 100.0	Strict
`TkA07G303320`	`LXL04_029329`	`JCVI_TKOH_00307`	99.2	100.0 / 90.037	Complex
`TkA07G303580`	`LXL04_029330`	`JCVI_TKOH_00307`	99.2	100.0 / 100.0	Review
`TkA07G303920`	`LXL04_029330`	`JCVI_TKOH_00307`	97.0	100.0 / 100.0	Complex
`TkA07G304990`	`LXL04_029337`	`JCVI_TKOH_00307`	92.8	85.0 / 50.329	Review
`TkA07G305250`	`LXL04_029340`	`JCVI_TKOH_00307`	98.7	98.438 / 41.069	Review
`TkA07G305390`	`LXL04_029343`	`JCVI_TKOH_00307`	99.7	95.092 / 94.512	Strict
`TkA07G305420`	`LXL04_029344`	`JCVI_TKOH_00307`	81.6	100.0 / 100.0	Review
`TkA07G305520`	`LXL04_029344`	`JCVI_TKOH_00307`	86.2	86.224 / 85.965	Complex
`TkA07G306150`	`LXL04_029351`	`JCVI_TKOH_00307`	100.0	100.0 / 44.553	Review
`TkA07G306500`	`LXL04_029353`	`JCVI_TKOH_00307`	89.7	96.648 / 21.932	Complex
`TkA07G306540`	`LXL04_029354`	`JCVI_TKOH_00307`	94.4	100.0 / 100.0	Complex
`TkA07G306560`	`LXL04_029355`	`JCVI_TKOH_00307`	93.9	100.0 / 100.0	Probable
`TkA07G306630`	`LXL04_029356`	`JCVI_TKOH_00307`	100.0	90.995 / 100.0	Strict
`TkA07G306640`	`LXL04_029357`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G306810`	`LXL04_029359`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G306910`	`LXL04_029360`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G307150`	`LXL04_029362`	`JCVI_TKOH_00307`	95.0	100.0 / 100.0	Strict
`TkA07G307160`	`LXL04_029365`	`JCVI_TKOH_00307`	97.6	100.0 / 100.0	Strict
`TkA07G307210`	`LXL04_029367`	`JCVI_TKOH_00307`	97.1	96.588 / 93.599	Complex
`TkA07G307220`	`LXL04_029368`	`JCVI_TKOH_00307`	97.7	100.0 / 61.98	Complex
`TkA07G307320`	`LXL04_029370`	`JCVI_TKOH_00307`	80.9	81.301 / 45.0	Complex
`TkA07G307720`	`LXL04_029372`	`JCVI_TKOH_00307`	68.7	71.512 / 47.977	Review
`TkA07G307730`	`LXL04_029373`	`JCVI_TKOH_00307`	97.3	100.0 / 16.303	Review
`TkA07G307870`	`LXL04_029373`	`JCVI_TKOH_00307`	85.0	82.397 / 28.675	Complex
`TkA07G307980`	`LXL04_029374`	`JCVI_TKOH_00307`	99.7	100.0 / 100.0	Strict
`TkA07G307990`	`LXL04_029375`	`JCVI_TKOH_00307`	98.6	100.0 / 100.0	Strict
`TkA07G308260`	`LXL04_029377`	`JCVI_TKOH_00307`	100.0	100.0 / 53.689	Review
`TkA07G308380`	`LXL04_029379`	`JCVI_TKOH_00307`	98.2	18.729 / 19.929	Review
`TkA07G308460`	`LXL04_029380`	`JCVI_TKOH_00307`	94.4	97.297 / 65.217	Review
`TkA07G308500`	`LXL04_029381`	`JCVI_TKOH_00307`	99.1	100.0 / 100.0	Strict
`TkA07G308640`	`LXL04_029383`	`JCVI_TKOH_00307`	100.0	100.0 / 51.902	Review
`TkA07G308720`	`LXL04_029384`	`JCVI_TKOH_00307`	93.0	100.0 / 100.0	Probable
`TkA07G308950`	`LXL04_029385`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G309010`	`LXL04_029386`	`JCVI_TKOH_00307`	94.6	99.257 / 80.636	Probable
`TkA07G309070`	`LXL04_029389`	`JCVI_TKOH_00307`	97.7	77.515 / 47.464	Complex
`TkA07G309090`	`LXL04_029388`	`JCVI_TKOH_00307`	99.5	98.055 / 79.085	Complex
`TkA07G309160`	`LXL04_029389`	`JCVI_TKOH_00307`	93.3	80.357 / 48.913	Complex
`TkA07G309180`	`LXL04_029388`	`JCVI_TKOH_00307`	99.6	98.965 / 100.0	Review
`TkA07G309250`	`LXL04_029389`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Complex
`TkA07G309440`	`LXL04_029388`	`JCVI_TKOH_00307`	97.4	98.965 / 100.0	Complex
`TkA07G309590`	`LXL04_029396`	`JCVI_TKOH_00307`	99.4	98.758 / 20.976	Review
`TkA07G309860`	`LXL04_029394`	`JCVI_TKOH_00307`	99.6	100.0 / 87.879	Complex
`TkA07G309870`	`LXL04_029395`	`JCVI_TKOH_00307`	90.8	94.628 / 89.126	Complex
`TkA07G309940`	`LXL04_029396`	`JCVI_TKOH_00307`	94.4	98.561 / 54.354	Complex
`TkA07G310260`	`LXL04_029399`	`JCVI_TKOH_00307`	99.5	100.0 / 100.0	Complex
`TkA07G310370`	`LXL04_029400`	`JCVI_TKOH_00307`	99.3	100.0 / 100.0	Strict
`TkA07G310460`	`LXL04_029404`	`JCVI_TKOH_00307`	92.1	100.0 / 100.0	Complex
`TkA07G310530`	`LXL04_029405`	`JCVI_TKOH_00307`	96.4	100.0 / 89.275	Strict
`TkA07G310540`	`LXL04_029406`	`JCVI_TKOH_00307`	100.0	100.0 / 100.0	Strict
`TkA07G310550`	`LXL04_029407`	`JCVI_TKOH_00307`	100.0	100.0 / 64.596	Complex
`TkA07G311470`	`LXL04_029410`	`JCVI_TKOH_00307`	92.8	99.574 / 73.292	Probable