Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00193
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 224
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00193The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00193 |
Chr04:35195530-48013578 | Chr08:10359612-21432966 | mixed | 224 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 224 · Showing 201–224 · Page 2/2
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA04G175090 | LXL04_035048 | JCVI_TKOH_00193 | 96.0 | 100.0 / 100.0 | Complex |
TkA04G175210 | LXL04_035047 | JCVI_TKOH_00193 | 95.3 | 100.0 / 89.212 | Strict |
TkA04G175510 | LXL04_035045 | JCVI_TKOH_00193 | 97.8 | 95.936 / 94.473 | Strict |
TkA04G175590 | LXL04_035044 | JCVI_TKOH_00193 | 99.8 | 88.571 / 56.128 | Review |
TkA04G175660 | LXL04_035043 | JCVI_TKOH_00193 | 99.8 | 92.469 / 85.0 | Complex |
TkA04G177490 | LXL04_035037 | JCVI_TKOH_00193 | 100.0 | 86.413 / 61.868 | Complex |
TkA04G177580 | LXL04_035033 | JCVI_TKOH_00193 | 98.1 | 100.0 / 100.0 | Complex |
TkA04G177600 | LXL04_035031 | JCVI_TKOH_00193 | 99.7 | 100.0 / 100.0 | Complex |
TkA04G177640 | LXL04_035029 | JCVI_TKOH_00193 | 89.6 | 48.322 / 90.845 | Review |
TkA04G177650 | LXL04_035028 | JCVI_TKOH_00193 | 98.5 | 100.0 / 89.693 | Complex |
TkA04G177750 | LXL04_035027 | JCVI_TKOH_00193 | 98.7 | 100.0 / 95.983 | Review |
TkA04G177920 | LXL04_035021 | JCVI_TKOH_00193 | 93.5 | 86.62 / 69.492 | Complex |
TkA04G178100 | LXL04_035022 | JCVI_TKOH_00193 | 97.4 | 100.0 / 100.0 | Strict |
TkA04G178110 | LXL04_035023 | JCVI_TKOH_00193 | 99.0 | 100.0 / 100.0 | Strict |
TkA04G178280 | LXL04_035027 | JCVI_TKOH_00193 | 97.9 | 100.0 / 95.983 | Review |
TkA04G178370 | LXL04_035028 | JCVI_TKOH_00193 | 96.3 | 100.0 / 89.693 | Complex |
TkA04G178600 | LXL04_035031 | JCVI_TKOH_00193 | 100.0 | 100.0 / 100.0 | Complex |
TkA04G178610 | LXL04_035033 | JCVI_TKOH_00193 | 100.0 | 100.0 / 100.0 | Complex |
TkA04G178830 | LXL04_035037 | JCVI_TKOH_00193 | 99.4 | 100.0 / 65.37 | Review |
TkA04G180120 | LXL04_035019 | JCVI_TKOH_00193 | 95.0 | 87.328 / 57.143 | Review |
TkA04G180360 | LXL04_035016 | JCVI_TKOH_00193 | 99.6 | 99.81 / 74.822 | Complex |
TkA04G180420 | LXL04_035015 | JCVI_TKOH_00193 | 100.0 | 100.0 / 100.0 | Complex |
TkA04G183730 | LXL04_035002 | JCVI_TKOH_00193 | 99.6 | 100.0 / 100.0 | Complex |
TkA04G185770 | LXL04_035000 | JCVI_TKOH_00193 | 98.9 | 80.357 / 100.0 | Strict |