Subcellular Localization

LocPro localization results for the two rubber dandelion protein FASTA sets, TK1151 and OH-1004; displayed data follow the input ID version.

Examples TkA01G624900 LXL04_000258

Dual-reference IDs

Input ID TkA08G415040

TK1151 ID TkA08G415040

OH-1004 ID LXL04_034694

Main locations use complete ESM2 + PROFEAT features and probability calibration against independent experimentally annotated reference proteins. This is not experimental localization in rubber dandelion. Multiple locations are supported, so probabilities need not sum to one. Detailed-location scores remain uncalibrated and are shown separately.

Calibration method and independent validation metrics

Search Results

Download calibrated main-location results

Top1 predicted location Lysosome / Vacuole

Top1 probability (benchmark calibrated) 0.362

Gene ID TkA08G415040

Data version TK1151

ModelLocPro

Model downloadLocPro model folder

PaperYintao Zhang et al. LocPro: A deep learning-based prediction of protein subcellular localization for promoting multi-directional pharmaceutical research. J Pharm Anal. 2025. doi:10.1016/j.jpha.2025.101255

Lysosome / Vacuole0.362

Rank 1 · TkA08G415040 · TK1151

Golgi apparatus0.232

Rank 2 · TkA08G415040 · TK1151

Extracellular0.209

Rank 3 · TkA08G415040 · TK1151

Endoplasmic reticulum0.163

Rank 4 · TkA08G415040 · TK1151

Cytoplasm0.153

Rank 5 · TkA08G415040 · TK1151

Detailed locations (uncalibrated model scores)

These scores support exploratory ranking and must not be interpreted as localization probabilities. The model contains cross-species categories; these outputs do not establish the corresponding structures or localization in rubber dandelion.

Location	Raw score
Vacuole	0.303
Cell wall	0.300
Secreted	0.283
Golgi apparatus	0.267
Cell membrane	0.226