TkAUNG016690 | RubberDandelionOmics

Gene overview

TkAUNG016690

Reference: TK1151 Chr: ChrUn Coordinates: 4467069-4467858 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

669 bp · TkAUNG016690|TK1151|cDNA

ATGTTTAATCTAGGCACCGCGCCGCACCAGAGCATAGCCCACCTCCAACCAAAGTACGGCTCCGTCGTATGGCTCAAGCTCGGCTCCGTCAACACAATGGCGATCCTCACAGCAAAAGCCGCCGCCGAGTTTTCAAAAAACCACGACGTCGCCTTCGCAGATCGCAGCATCGTCGAGACCATGACGGCTCACGGCTACCACCACGGCTCGCTAGCATTAGCCCCTCACGGCTCACGGTGGCGCATGCTGCGGCGGCTCTG...

CDS

Download CDS FASTA

669 bp · TkAUNG016690|TK1151|CDS

ATGTTTAATCTAGGCACCGCGCCGCACCAGAGCATAGCCCACCTCCAACCAAAGTACGGCTCCGTCGTATGGCTCAAGCTCGGCTCCGTCAACACAATGGCGATCCTCACAGCAAAAGCCGCCGCCGAGTTTTCAAAAAACCACGACGTCGCCTTCGCAGATCGCAGCATCGTCGAGACCATGACGGCTCACGGCTACCACCACGGCTCGCTAGCATTAGCCCCTCACGGCTCACGGTGGCGCATGCTGCGGCGGCTCTG...

Protein

Download Protein FASTA

222 aa · TkAUNG016690|TK1151|PROTEIN

MFNLGTAPHQSIAHLQPKYGSVVWLKLGSVNTMAILTAKAAAEFSKNHDVAFADRSIVETMTAHGYHHGSLALAPHGSRWRMLRRLCTVEMFSNKRINETAAIRRRDLVDAESEKGMEFYGAMKRVMEWSGSPNVSDLFPWLRWMDLQGLKRRANRDMGIAFRIASEFVGERIRNREEDDKGNQLDFLDVLLHCREDSEDYRTLRSSFLYWYFSLSDKLISK

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkAUNG016690`
TK1151 ID	TkAUNG016690
OH-1004 ID	LXL04_005063
Relationship / confidence	Non Reciprocal Best Hit / Complex relationship
Protein identity (%)	44.700
Protein coverage (%)	TK1151 90.090 / OH-1004 48.521 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID	`TkAUNG016690`
Location	ChrUn:4467069-4467858 (+)
Description	Similar to CYP76A2: Cytochrome P450 76A2
Arabidopsis / Rice Reference Genes and Papers	Download references for this gene Arabidopsis No hit for this species in the current source table. Rice No hit for this species in the current source table.
Functional annotation source	View annotation sources Functional annotation source: OH1004 · `LXL04_005063` · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
GO annotations (OH1004 source)	GO:0009753 response to jasmonic acid Biological Process GO:0016099 monoterpenoid biosynthetic process Biological Process GO:0016114 terpenoid biosynthetic process Biological Process GO:0035834 indole alkaloid metabolic process Biological Process GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0031969 chloroplast membrane Cellular Component GO:0004497 monooxygenase activity Molecular Function GO:0005506 iron ion binding Molecular Function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Molecular Function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Molecular Function GO:0020037 heme binding Molecular Function
KEGG gene cross-reference	ag:CAA50648 ag:CAA50649 ag:CAC80883 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.924

Rank 1 · TkAUNG016690 · TK1151

Cell membrane0.039

Rank 2 · TkAUNG016690 · TK1151

Cytoplasm0.039

Rank 3 · TkAUNG016690 · TK1151

Plastid0.024

Rank 4 · TkAUNG016690 · TK1151

Nucleus0.022

Rank 5 · TkAUNG016690 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00067p4506-109 aa

PF14269Arylsulfotran_210-59 aa

PF17718DUF556329-55 aa

PF00067p450113-198 aa

PF17718DUF5563163-193 aa

Gene ID	Domain ID	Domain Name	Start aa	End aa	E-value	Score
TkAUNG016690	`PF00067`	p450	6	109	1.9e-16	60.6
TkAUNG016690	`PF14269`	Arylsulfotran_2	10	59	0.088	12.9
TkAUNG016690	`PF17718`	DUF5563	29	55	0.0024	18.1
TkAUNG016690	`PF00067`	p450	113	198	1.9e-16	60.6
TkAUNG016690	`PF17718`	DUF5563	163	193	0.0024	18.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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