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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G320460
Reference: TK1151 Chr: Chr08 Coordinates: 82759951-82760505 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

348 bp · TkA08G320460|TK1151|cDNA

CTTCTTCGTCGATCCCACCACTTGCCCGAGAGAACCCCACGAAATTGGAATCAGGCAGCGAAAGGACGAGCAGCACACGGCAGTTCTGGCAGCGAATCCACGAGCAGCACACGGCAGATGCAACCGGTGGACCAATTTTGCGGCGGTCCTGGTGCGATTCAAAAAAACGATTCCGTCTCAGCACTGGTGCTCCGCCGCTACTTTGACTCAGCCAAGATCTACCTTTGTTTCCACTGTCTACCGCAACCATCTAACCATTC...

CDS

Download CDS FASTA

348 bp · TkA08G320460|TK1151|CDS

CTTCTTCGTCGATCCCACCACTTGCCCGAGAGAACCCCACGAAATTGGAATCAGGCAGCGAAAGGACGAGCAGCACACGGCAGTTCTGGCAGCGAATCCACGAGCAGCACACGGCAGATGCAACCGGTGGACCAATTTTGCGGCGGTCCTGGTGCGATTCAAAAAAACGATTCCGTCTCAGCACTGGTGCTCCGCCGCTACTTTGACTCAGCCAAGATCTACCTTTGTTTCCACTGTCTACCGCAACCATCTAACCATTC...

Protein

Download Protein FASTA

115 aa · TkA08G320460|TK1151|PROTEIN

LLRRSHHLPERTPRNWNQAAKGRAAHGSSGSESTSSTRQMQPVDQFCGGPGAIQKNDSVSALVLRRYFDSAKIYLCFHCLPQPSNHSRYYFLGVLLYLGLHYGRGFGGFHCLLLL

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G320460
TK1151 IDTkA08G320460
OH-1004 IDLXL04_020543
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)81.500
Protein coverage (%)TK1151 23.478 / OH-1004 5.934
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G320460
LocationChr08:82759951-82760505 (-)
DescriptionSimilar to BUBR1: Mitotic spindle checkpoint protein BUBR1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_020543 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007091 metaphase/anaphase transition of mitotic cell cycle Biological Process
GO:0007094 mitotic spindle assembly checkpoint signaling Biological Process
GO:0045841 negative regulation of mitotic metaphase/anaphase transition Biological Process
GO:0051301 cell division Biological Process
GO:0051754 meiotic sister chromatid cohesion, centromeric Biological Process
GO:0071459 protein localization to chromosome, centromeric region Biological Process
GO:0000776 kinetochore Cellular Component
GO:0000940 outer kinetochore Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005680 anaphase-promoting complex Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005813 centrosome Cellular Component
KEGG gene cross-reference
ath:AT2G33560
ddi:DDB_G0292676
hsa:701
mmu:12236
spo:2539219
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.424
Rank 1 · TkA08G320460 · TK1151
Cytoplasm0.382
Rank 2 · TkA08G320460 · TK1151
Mitochondrion0.138
Rank 3 · TkA08G320460 · TK1151
Cell membrane0.107
Rank 4 · TkA08G320460 · TK1151
Endoplasmic reticulum0.095
Rank 5 · TkA08G320460 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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