Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1959 bp · TkA07G040840|TK1151|cDNA
CACCAGGTCCCACTCCACTCACCCCACAGGCCACAACCACTTGTGCATTCTCCATACGATCAATTGATCTCTCGTTTGCCACTTTCTTCCATAAAACCCACAACAAAATGAATCACAGAGCACCGGAAAACACCCACTACGAGCAATATCGTACTTTCAGGGCAAAGGTTCCGCCTTTTTCCGGCTAAGATCACAGTTTCCGGCTATACGTTTGTCGCCGATTGAGATGGAATTAGGAACATGGAGGCTGCTTTTGTCTT...
1509 bp · TkA07G040840|TK1151|CDS
ATGGAATTAGGAACATGGAGGCTGCTTTTGTCTTTAATACCATTGCTTCTCTCTGTGCTCTTCATCTTCTACTCCAATTACAACTCTTTAAAGCCTACAACAAGTGGGTGCAGCCTTTTTCCTCACGATCATTTTTGGATTGCTAGCAAACGCATTGTGACACCCAATGAGATCATTTCTGGCGCAGTTGAGATCAAAGGAGGAATCATCATATCATTATTTAAACAAAAAGATTGGGAGGGACAAGTGAAGAGTGAACC...
Protein
Download Protein FASTA502 aa · TkA07G040840|TK1151|PROTEIN
MELGTWRLLLSLIPLLLSVLFIFYSNYNSLKPTTSGCSLFPHDHFWIASKRIVTPNEIISGAVEIKGGIIISLFKQKDWEGQVKSEPVIDYGEAVVMPGLIDVHAHLDDPGREEWEGFPSGTKAAAAGGITTLIDMPLNSFPSTVSKETLQLKKDAAKGRIFVNVGFWGGLVPENAFNASILEGLLEAGALGLKSFMCPSGINDFPMTDATHIKEGLSVLAKYKRPLLVHAEKQQETEMEDGVNDPRSYSTYLKTRPASW...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G040840 |
|---|---|
| TK1151 ID | TkA07G040840 |
| OH-1004 ID | LXL04_009499 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 55.800 |
| Protein coverage (%) | TK1151 10.359 / OH-1004 19.084Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G040840 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:10936934-10948144 (+) | ||||||||||||
| Description | Similar to STL2: Probable glycosyltransferase STELLO2 | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
| ||||||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0000256 allantoin catabolic process Biological Process GO:0006145 purine nucleobase catabolic process Biological Process GO:0006995 cellular response to nitrogen starvation Biological Process GO:0008104 intracellular protein localization Biological Process GO:0010136 ureide catabolic process Biological Process GO:0052324 plant-type cell wall cellulose biosynthetic process Biological Process GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process Biological Process GO:0000139 Golgi membrane Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005768 endosome Cellular Component GO:0005783 endoplasmic reticulum Cellular Component | ||||||||||||
| KEGG gene cross-reference | ath:AT2G41770 ath:AT3G57420 ath:AT4G04955 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF24890ALN_composite40-94 aaPF07969Amidohydro_388-133 aaPF01979Amidohydro_195-485 aaPF12890DHOase95-292 aaPF07969Amidohydro_3405-486 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G040840 | PF24890 | ALN_composite | 40 | 94 | 5.7e-28 | 97.4 |
| TkA07G040840 | PF07969 | Amidohydro_3 | 88 | 133 | 5.7e-14 | 53.2 |
| TkA07G040840 | PF01979 | Amidohydro_1 | 95 | 485 | 1.3e-27 | 97.7 |
| TkA07G040840 | PF12890 | DHOase | 95 | 292 | 9.3e-10 | 39.3 |
| TkA07G040840 | PF07969 | Amidohydro_3 | 405 | 486 | 5.7e-14 | 53.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.