Gene Card
Gene overview
cDNA / CDS / Protein Sequences
600 bp · TkA06G148070|TK1151|cDNA
TCGCCACCGACGACGGCAACGAGCCTTCCGTCAGCCTCTTCACTGAAAAATGCGGCTACTCGAAGTTCCGTAACCCCTCCGTCCTCGTCCACCGGTGTTCGCTCACCGGATCCCGGTAAGCAACCGTATAAACATCATCAAACTCACTCCCTCCGACGCCGAGTCACTCTACCGGCACCGATTCTCCACCACCGAGTTTTTCCGCGCGACATTGACTCGGTGCTTAACAACCACCTCAACCTCGGCACGTTCCTCGCGTT...
600 bp · TkA06G148070|TK1151|CDS
TCGCCACCGACGACGGCAACGAGCCTTCCGTCAGCCTCTTCACTGAAAAATGCGGCTACTCGAAGTTCCGTAACCCCTCCGTCCTCGTCCACCGGTGTTCGCTCACCGGATCCCGGTAAGCAACCGTATAAACATCATCAAACTCACTCCCTCCGACGCCGAGTCACTCTACCGGCACCGATTCTCCACCACCGAGTTTTTCCGCGCGACATTGACTCGGTGCTTAACAACCACCTCAACCTCGGCACGTTCCTCGCGTT...
Protein
Download Protein FASTA199 aa · TkA06G148070|TK1151|PROTEIN
SPPTTATSLPSASSLKNAATRSSVTPPSSSTGVRSPDPGKQPYKHHQTHSLRRRVTLPAPILHHRVFPRDIDSVLNNHLNLGTFLALPKGYIWAGSSHFLKNPPENWAVMSVWNCKDVFKLQVKGASKLRRGLAKTTRILDRIFPFLRLPSLPKIFSPFGLHMLYGLGGSGPMYTRFAKGLFGFAHNLAKECKCVCGGN
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G148070 |
|---|---|
| TK1151 ID | TkA06G148070 |
| OH-1004 ID | LXL04_024395 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 64.322 / OH-1004 28.132Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G148070 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:38834800-38835399 (-) | |||||||||
| Description | Similar to HLS1: Probable N-acetyltransferase HLS1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009640 photomorphogenesis Biological Process GO:0009723 response to ethylene Biological Process GO:0009734 auxin-activated signaling pathway Biological Process GO:0009826 unidimensional cell growth Biological Process GO:0005634 nucleus Cellular Component GO:0008080 N-acetyltransferase activity Molecular Function GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G23060 ath:AT4G37580 osa:107275998 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF04771CAV_VP36-52 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA06G148070 | PF04771 | CAV_VP3 | 6 | 52 | 0.14 | 13.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.