Gene Card
Gene overview
cDNA / CDS / Protein Sequences
309 bp · TkA05G428420|TK1151|cDNA
ATGAACTGCGACGGTCGGATTTCACGAAGCAGCTACCTAGGGTTTCATACTCAGCACACCTACGGATCTCCTCTCCCTGCTAATGGTGATTCAGTCAGAAGACGATGCTCTGTTTTACAGTGGCATCCTGATTTTGCCACTCAACTGATTGTTGCTTCAGATGATGATGATAGCTCACCTTCTTTGCGGCAATTAAGCTCAGACAACACCAAAAGCAGTGAATCACATTTGACTACAGCTGTTAGTTCACCCTTTTCTTC...
309 bp · TkA05G428420|TK1151|CDS
ATGAACTGCGACGGTCGGATTTCACGAAGCAGCTACCTAGGGTTTCATACTCAGCACACCTACGGATCTCCTCTCCCTGCTAATGGTGATTCAGTCAGAAGACGATGCTCTGTTTTACAGTGGCATCCTGATTTTGCCACTCAACTGATTGTTGCTTCAGATGATGATGATAGCTCACCTTCTTTGCGGCAATTAAGCTCAGACAACACCAAAAGCAGTGAATCACATTTGACTACAGCTGTTAGTTCACCCTTTTCTTC...
Protein
Download Protein FASTA102 aa · TkA05G428420|TK1151|PROTEIN
MNCDGRISRSSYLGFHTQHTYGSPLPANGDSVRRRCSVLQWHPDFATQLIVASDDDDSSPSLRQLSSDNTKSSESHLTTAVSSPFSSGLFGSASSTPNFSRI
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G428420 |
|---|---|
| TK1151 ID | TkA05G428420 |
| OH-1004 ID | LXL04_028465 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 98.700 |
| Protein coverage (%) | TK1151 75.490 / OH-1004 22.353Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G428420 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr05:106823769-106824712 (+) | ||||||
| Description | Similar to SEC31B: Protein transport protein SEC31 homolog B | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0007029 endoplasmic reticulum organization Biological Process GO:0015031 protein transport Biological Process GO:0090110 COPII-coated vesicle cargo loading Biological Process GO:0005737 cytoplasm Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0005829 cytosol Cellular Component GO:0009506 plasmodesma Cellular Component GO:0030127 COPII vesicle coat Cellular Component GO:0070971 endoplasmic reticulum exit site Cellular Component GO:0005198 structural molecule activity Molecular Function | ||||||
| KEGG gene cross-reference | ath:AT3G63460 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q8L611 | Arabidopsis thaliana | sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B | 65.000% | Swiss-Prot | Low |