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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G387130
Reference: TK1151 Chr: Chr05 Coordinates: 96198502-96202881 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1593 bp · TkA05G387130|TK1151|cDNA

AACCTGCAATCATGTCAAACAAAGAGTCATCATTCATGGATCAATCTGGTTTATCACCACAAACCCTACCTTACCATAGCACATCAAAACTGTTGTGCAAATCTCGATTACAATCGTTACCCTGAATCTCTTCATATTCTAATCGAGTTCCTGAAATCATCCATCCTTAATACCGCACTGACTGCACATGCCAAAGTTTCCATGAAAGCTCTTACTAGAGCTTATACAACTTCGAAATACAACACCAAGGAGAATGTTGT...

CDS

Download CDS FASTA

1593 bp · TkA05G387130|TK1151|CDS

AACCTGCAATCATGTCAAACAAAGAGTCATCATTCATGGATCAATCTGGTTTATCACCACAAACCCTACCTTACCATAGCACATCAAAACTGTTGTGCAAATCTCGATTACAATCGTTACCCTGAATCTCTTCATATTCTAATCGAGTTCCTGAAATCATCCATCCTTAATACCGCACTGACTGCACATGCCAAAGTTTCCATGAAAGCTCTTACTAGAGCTTATACAACTTCGAAATACAACACCAAGGAGAATGTTGT...

Protein

Download Protein FASTA

530 aa · TkA05G387130|TK1151|PROTEIN

NLQSCQTKSHHSWINLVYHHKPYLTIAHQNCCANLDYNRYPESLHILIEFLKSSILNTALTAHAKVSMKALTRAYTTSKYNTKENVVEFELETGNRTAISKLSFTKLLNLSTDPALMDPDKISSSDIINTFNQMGHTPILTRLSAFKKNKLPSLWSCMFTILFKCLAERQKGTDSASKQFLTLLHALFTDLPIDLAKILWTQICESPTSATKDTEISMARFWSLVVEYAHRHYHIVQIPPLTEETTAKFPELKIGKLQVK...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G387130
TK1151 IDTkA05G387130
OH-1004 IDLXL04_037282
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)54.600
Protein coverage (%)TK1151 94.906 / OH-1004 44.249
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G387130
LocationChr05:96198502-96202881 (-)
DescriptionSimilar to EEF1AKMT2: EEF1A lysine methyltransferase 2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_037282 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006479 protein methylation Biological Process
GO:0018022 peptidyl-lysine methylation Biological Process
GO:0005634 nucleus Cellular Component
GO:0005654 nucleoplasm Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0008168 methyltransferase activity Molecular Function
GO:0016279 protein-lysine N-methyltransferase activity Molecular Function
KEGG gene cross-reference
dre:503749
hsa:399818
mmu:72096
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.726
Rank 1 · TkA05G387130 · TK1151
Cytoplasm0.320
Rank 2 · TkA05G387130 · TK1151
Mitochondrion0.036
Rank 3 · TkA05G387130 · TK1151
Cell membrane0.023
Rank 4 · TkA05G387130 · TK1151
Endoplasmic reticulum0.016
Rank 5 · TkA05G387130 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF24235RHG29_45_N30-59 aa
PF15372DUF4600127-150 aa
PF30841Cas_TM1802_C159-243 aa
PF04513Baculo_PEP_C409-492 aa
PF07889DUF1664416-511 aa
PF24235RHG29_45_N422-508 aa
PF04871Uso1_p115_C423-520 aa
PF15372DUF4600426-503 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G387130PF24235RHG29_45_N30594.98.2
TkA05G387130PF15372DUF46001271500.2412.4
TkA05G387130PF30841Cas_TM1802_C1592430.00816.5
TkA05G387130PF04513Baculo_PEP_C4094920.5910.9
TkA05G387130PF07889DUF16644165114.58.1
TkA05G387130PF24235RHG29_45_N4225084.98.2
TkA05G387130PF04871Uso1_p115_C4235201.110.3
TkA05G387130PF15372DUF46004265030.2412.4
TkA05G387130PF27400TP_07004294772.78.6
TkA05G387130PF08965Aca2_YdiL4365000.06214.2
TkA05G387130PF13779DUF41754505080.111.2
TkA05G387130PF30841Cas_TM1802_C4544820.00816.5
TkA05G387130PF27400TP_07004895062.78.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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