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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G014840
Reference: TK1151 Chr: Chr05 Coordinates: 4172711-4174799 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1283 bp · TkA05G014840|TK1151|cDNA

ACTCTTGTGTACAAAGAAATAAAAAACTATTCACGTTCTCCTTCCCTTCAGTTCCGAACCAAAATCCAAATTACTTCACGTATTCTCCCAATCGCTCACTTCAGTACCAAAATCCAAAATACTTCACGTATTCTCCCAATCGAAGCTTCGATTAGGTAATCACCATCGTCAGTGCTGCATTCCAACGGCACTGCTTCAGTACCGGAATCCAAAGTTTGAAGCCCTAATTCTCCCAAATTGAATCGGCGAACTGCACTTTG...

CDS

Download CDS FASTA

522 bp · TkA05G014840|TK1151|CDS

ATGGAGGCTTTGCTGTCCACTGGTGTTGAAGTTGATTCACAAAGTGATGCTGGCACACCACTTGTTTGGGCTTCTGGTCATGGGCTGCAACATGCTTTAAAACTTCTACTAAAACACAAAGCTGATCCTAATATTGAAATTGATGATGGGATTACCCCTCTGCTGTCAGCTGTAGCTGCAGGCTCACTCCCATGTTTAGAGCTTTTAATTCTGGCAGGTGGTAAAGTAAACATTACTGCTGGTGGAGCAACCCCATTACA...

Protein

Download Protein FASTA

173 aa · TkA05G014840|TK1151|PROTEIN

MEALLSTGVEVDSQSDAGTPLVWASGHGLQHALKLLLKHKADPNIEIDDGITPLLSAVAAGSLPCLELLILAGGKVNITAGGATPLHVAADIGNSELITCLLKSRADPNVIDEEGWKPVQVAALRGNRGAVEVRVPVTSHVETVPNWTVDGLIQYMQSEGSKNKVLNLIFFCF

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G014840
TK1151 IDTkA05G014840
OH-1004 IDLXL04_019049
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)98.800
Protein coverage (%)TK1151 94.798 / OH-1004 68.619
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G014840
LocationChr05:4172711-4174799 (+)
DescriptionSimilar to ANK1: Ankyrin-1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_019049 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006887 exocytosis Biological Process
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport Biological Process
GO:0007010 cytoskeleton organization Biological Process
GO:0007165 signal transduction Biological Process
GO:0045199 maintenance of epithelial cell apical/basal polarity Biological Process
GO:0072659 protein localization to plasma membrane Biological Process
GO:0005829 cytosol Cellular Component
GO:0005856 cytoskeleton Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009898 cytoplasmic side of plasma membrane Cellular Component
GO:0014731 spectrin-associated cytoskeleton Cellular Component
GO:0170014 ankyrin-1 complex Cellular Component
KEGG gene cross-reference
hsa:286
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.573
Rank 1 · TkA05G014840 · TK1151
Nucleus0.389
Rank 2 · TkA05G014840 · TK1151
Mitochondrion0.106
Rank 3 · TkA05G014840 · TK1151
Cell membrane0.080
Rank 4 · TkA05G014840 · TK1151
Endoplasmic reticulum0.056
Rank 5 · TkA05G014840 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12796Ank_22-79 aa
PF00023Ank2-14 aa
PF13637Ank_42-28 aa
PF13857Ank_54-54 aa
PF24521Ank_KRIT111-70 aa
PF00023Ank19-45 aa
PF13606Ank_319-45 aa
PF13637Ank_422-70 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G014840PF12796Ank_22796e-2072.3
TkA05G014840PF00023Ank2142.9e-1968.8
TkA05G014840PF13637Ank_42289.3e-1761.5
TkA05G014840PF13857Ank_54542e-1144.7
TkA05G014840PF24521Ank_KRIT111700.0314.7
TkA05G014840PF00023Ank19452.9e-1968.8
TkA05G014840PF13606Ank_319456.9e-1451.2
TkA05G014840PF13637Ank_422709.3e-1761.5
TkA05G014840PF13857Ank_536782e-1144.7
TkA05G014840PF00023Ank49792.9e-1968.8
TkA05G014840PF13606Ank_349776.9e-1451.2
TkA05G014840PF12796Ank_2571326e-2072.3
TkA05G014840PF13857Ank_5791222e-1144.7
TkA05G014840PF13637Ank_4801029.3e-1761.5
TkA05G014840PF00023Ank821122.9e-1968.8
TkA05G014840PF13606Ank_3821106.9e-1451.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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