Gene Card
Gene overview
cDNA / CDS / Protein Sequences
354 bp · TkA03G423940|TK1151|cDNA
ATGACGAAAACTCAGATATTCTGGAAACCTAACTCAATGGACAACATTTCTCTGTCTCACAAGCCAAGTCTAATTCGGACTTTAAGCAGAACTAGAGTGACTAGACTCTCCCCCGATCCAAAGCTTCCTGGTGGCTGTCTTCAAACCGACAGCAGCAAAATTTCGATGCTAGTCCTTGATCGATCTCAACAGCCGCACACAACGAGGAGCACAAGATTTCCGGAAAGTTTAACTATCCCCACGGCTGTTCTCCTTCTCGG...
354 bp · TkA03G423940|TK1151|CDS
ATGACGAAAACTCAGATATTCTGGAAACCTAACTCAATGGACAACATTTCTCTGTCTCACAAGCCAAGTCTAATTCGGACTTTAAGCAGAACTAGAGTGACTAGACTCTCCCCCGATCCAAAGCTTCCTGGTGGCTGTCTTCAAACCGACAGCAGCAAAATTTCGATGCTAGTCCTTGATCGATCTCAACAGCCGCACACAACGAGGAGCACAAGATTTCCGGAAAGTTTAACTATCCCCACGGCTGTTCTCCTTCTCGG...
Protein
Download Protein FASTA117 aa · TkA03G423940|TK1151|PROTEIN
MTKTQIFWKPNSMDNISLSHKPSLIRTLSRTRVTRLSPDPKLPGGCLQTDSSKISMLVLDRSQQPHTTRSTRFPESLTIPTAVLLLGSKEESRGRDGFLVECLNRNNKREGAENKVA
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G423940 |
|---|---|
| TK1151 ID | TkA03G423940 |
| OH-1004 ID | LXL04_004542 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 47.800 |
| Protein coverage (%) | TK1151 57.265 / OH-1004 33.514Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G423940 |
|---|---|
| Location | Chr03:105562382-105563073 (-) |
| Description | Similar to MCM6: DNA replication licensing factor MCM6 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000727 double-strand break repair via break-induced replication Biological Process GO:0006270 DNA replication initiation Biological Process GO:1902969 mitotic DNA replication Biological Process GO:0000347 THO complex Cellular Component GO:0000785 chromatin Cellular Component GO:0005634 nucleus Cellular Component GO:0042555 MCM complex Cellular Component GO:0003678 DNA helicase activity Molecular Function GO:0003697 single-stranded DNA binding Molecular Function GO:0005524 ATP binding Molecular Function GO:0008270 zinc ion binding Molecular Function GO:0016887 ATP hydrolysis activity Molecular Function |
| KEGG gene cross-reference | ath:AT5G44635 dosa:Os05g0235800 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.