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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G178370
Reference: TK1151 Chr: Chr03 Coordinates: 45040898-45041730 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

348 bp · TkA03G178370|TK1151|cDNA

ATGTGCTTCCTTCTCTGTCGCAGAGTAGGGATTTGGGTTCCCATGGAGGAACGAACAAAGGAGAAGAAGTTGAGTAGTAGTTCAGGGAGACAAGTGAAGGCTATGCTTCGGAAGAACTGGCTTCTCAAAATTCGTCATCCTTATATCACACTTGCGGAGATGGCAGAAGAGAAACACGGGTATGAGACATGGTCGGTTAATGGAAGGAAAAAAATCCCACGATTAAGACCACAAATTGCAGATTTGGAAATGATGTGGAG...

348 bp · TkA03G178370|TK1151|CDS

ATGTGCTTCCTTCTCTGTCGCAGAGTAGGGATTTGGGTTCCCATGGAGGAACGAACAAAGGAGAAGAAGTTGAGTAGTAGTTCAGGGAGACAAGTGAAGGCTATGCTTCGGAAGAACTGGCTTCTCAAAATTCGTCATCCTTATATCACACTTGCGGAGATGGCAGAAGAGAAACACGGGTATGAGACATGGTCGGTTAATGGAAGGAAAAAAATCCCACGATTAAGACCACAAATTGCAGATTTGGAAATGATGTGGAG...

115 aa · TkA03G178370|TK1151|PROTEIN

MCFLLCRRVGIWVPMEERTKEKKLSSSSGRQVKAMLRKNWLLKIRHPYITLAEMAEEKHGYETWSVNGRKKIPRLRPQIADLEMMWRLMFRFVAFQKKVGTAKRRQSKDSKKKTK

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G178370
TK1151 IDTkA03G178370
OH-1004 IDLXL04_011267
Relationship / confidenceMulti Candidate From Tk1151 / Complex relationship
Protein identity (%)93.400
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G178370
LocationChr03:45040898-45041730 (-)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_011267 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006869 lipid transport Biological Process
GO:0000325 plant-type vacuole Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0016020 membrane Cellular Component
GO:0005319 lipid transporter activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
GO:0042626 ATPase-coupled transmembrane transporter activity Molecular Function
GO:0140359 ABC-type transporter activity Molecular Function
KEGG gene cross-reference
ath:AT2G41700
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.278
Rank 1 · TkA03G178370 · TK1151
Cytoplasm0.269
Rank 2 · TkA03G178370 · TK1151
Mitochondrion0.251
Rank 3 · TkA03G178370 · TK1151
Cell membrane0.151
Rank 4 · TkA03G178370 · TK1151
Endoplasmic reticulum0.143
Rank 5 · TkA03G178370 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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