Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2639 bp · TkA03G176310|TK1151|cDNA
CTCCGTTCCATAATGATTGTCCATCTTTCCTTTTCCATTTATCCCAAAAATGCTCATTTTTAAATACTAAGGTCTAAGTAGACGGAGGAGGATTAGGCGTGTGTCCGTACGCCGACCAGTTGACATTTTAAAAACAATAACCGATTAACCAGACCCCTCCATCCGTCCAAAACCCCCCATACTCCCACCTTGATCTTCTGCTATACAATAGAATCTCACCGATTCAATTCACCGATCCATATACAATCACCATTTCCATC...
2082 bp · TkA03G176310|TK1151|CDS
ATGTCGTCTTCACTATTCAATTCTGATCACACCGACGTCAGCGAGTATATTGACGATGATCAGCCCACCATCCGAAGAATCCGCCTCCTGTCTCTCCACCTCAATCCGCCGCCGCTCCTCCACCATGACAACCAGCTTCAGCTCGAAGCCTGTTCTGCGCGTGCCAAGATGAACGTGGACGCTGGAAAACTGACTGGTTTTTTGAGGGGAAAACATAGGGACGTACAGGAGAGGGTTTTCGAGTATTTTAATTCGAGGCC...
Protein
Download Protein FASTA693 aa · TkA03G176310|TK1151|PROTEIN
MSSSLFNSDHTDVSEYIDDDQPTIRRIRLLSLHLNPPPLLHHDNQLQLEACSARAKMNVDAGKLTGFLRGKHRDVQERVFEYFNSRPDLQTPIEILKDDYRELCMRQLVGVVREAGIRPFRYVVDDPSMYFAIIEAVGSVDMSLGIKLGVQYSLWGGSVLNLGTKKHRDKYFEGIDNLEYLGCFAMTELHHGSNVQGIQTIAKFDPITDEFIITTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTNGVVTDMGVHAFIVP...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G176310 |
|---|---|
| TK1151 ID | TkA03G176310 |
| OH-1004 ID | LXL04_011006 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 37.800 |
| Protein coverage (%) | TK1151 83.983 / OH-1004 83.113Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G176310 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:44459339-44462938 (-) | |||||||||
| Description | Similar to ACX3: Acyl-coenzyme A oxidase 3, peroxisomal | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0001676 long-chain fatty acid metabolic process Biological Process GO:0006635 fatty acid beta-oxidation Biological Process GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase Biological Process GO:0051791 medium-chain fatty acid metabolic process Biological Process GO:0055088 lipid homeostasis Biological Process GO:0005576 extracellular region Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005777 peroxisome Cellular Component GO:0005829 cytosol Cellular Component GO:0009514 glyoxysome Cellular Component GO:0003997 acyl-CoA oxidase activity Molecular Function GO:0005504 fatty acid binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G06290 ath:AT1G06310 ath:AT5G65110 mmu:74121 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02771Acyl-CoA_dh_N128-174 aaPF02770Acyl-CoA_dh_M183-297 aaPF00441Acyl-CoA_dh_1330-486 aaPF22924ACOX_C_alpha1333-488 aaPF01756ACOX534-690 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA03G176310 | PF02771 | Acyl-CoA_dh_N | 128 | 174 | 0.068 | 14.3 |
| TkA03G176310 | PF02770 | Acyl-CoA_dh_M | 183 | 297 | 7.1e-12 | 46.1 |
| TkA03G176310 | PF00441 | Acyl-CoA_dh_1 | 330 | 486 | 4.1e-10 | 40.7 |
| TkA03G176310 | PF22924 | ACOX_C_alpha1 | 333 | 488 | 3e-50 | 171.0 |
| TkA03G176310 | PF01756 | ACOX | 534 | 690 | 1.7e-27 | 96.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.