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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G495620
Reference: TK1151 Chr: Chr02 Coordinates: 126904328-126906235 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1584 bp · TkA02G495620|TK1151|cDNA

AATACCCAAAGTTTAGTTTAGACGGCAATAAGTCAACTCCAAATACAACTACCAAACTTCCAAAGGTTAATTGCGACTGAACAGATGAACATAACAACCAAAGACGATCAACATATCCCACTTATTTAAATTTTCTGTTTAAGCCAATTTCATAGGAACTTTCGGTACTAACCCTGTAATCTAAACGATTATAAACTGGCTGGTTTCTATACACTTGCTCAACCCTAGATCGCAGCATCAACGATATCTCGACACCGCAT...

CDS

Download CDS FASTA

1092 bp · TkA02G495620|TK1151|CDS

ATGTATTTCACGATAACCAAGTCTATACTGACTTTAACTATCATTTTTACCCTCTTCCATACTCCAACTTTAGCAAGCTCACGATCACCCCATGTAATCAATTTCCGATCACCCAACCTTTACCCTGAGTCTCTCTCATGGGACCCAAAAGCTCAACACTTCATAGTCAGCTCCCTCCGCCACCCAACTCTCCTATCTGTTTCCGATGCCGGTGTCATCTCCACATTAGTCTCCGATGATTCCATTCCTGTCAACTCCTC...

Protein

Download Protein FASTA

363 aa · TkA02G495620|TK1151|PROTEIN

MYFTITKSILTLTIIFTLFHTPTLASSRSPHVINFRSPNLYPESLSWDPKAQHFIVSSLRHPTLLSVSDAGVISTLVSDDSIPVNSSFLGITIDSVHNRILTTIHSHSQPSNCALAAYDLRAPHHRLFLADLHDAASTTTATAANDVAVDFSGNAYVTNSASNLIWKVDIEGKSSVFSKAKTFTKTPGIPELPCGLNGIAYCSKGYLIVAQSNTGKLYKVDSEDGTARKIQLNKELDSPDGIAIRGDGVLLVVSQKKLYF...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G495620
TK1151 IDTkA02G495620
OH-1004 IDLXL04_013443
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)95.900
Protein coverage (%)TK1151 93.664 / OH-1004 88.083
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G495620
LocationChr02:126904328-126906235 (+)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_013443 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)No functional description available
KEGG gene cross-referenceNo functional description available
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Extracellular0.261
Rank 1 · TkA02G495620 · TK1151
Endoplasmic reticulum0.230
Rank 2 · TkA02G495620 · TK1151
Lysosome / Vacuole0.212
Rank 3 · TkA02G495620 · TK1151
Cell membrane0.177
Rank 4 · TkA02G495620 · TK1151
Cytoplasm0.121
Rank 5 · TkA02G495620 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF08450SGL42-254 aa
PF06977SdiA-regulated43-79 aa
PF25021TEN_NHL63-81 aa
PF06739SBBP90-102 aa
PF01436NHL91-101 aa
PF25021TEN_NHL98-182 aa
PF21959DUF6923140-230 aa
PF06739SBBP144-158 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G495620PF08450SGL422548.1e-0626.3
TkA02G495620PF06977SdiA-regulated43790.08712.7
TkA02G495620PF25021TEN_NHL63810.02614.2
TkA02G495620PF06739SBBP901020.03414.8
TkA02G495620PF01436NHL911010.1412.9
TkA02G495620PF25021TEN_NHL981820.02614.2
TkA02G495620PF21959DUF69231402300.005217.3
TkA02G495620PF06739SBBP1441580.03414.8
TkA02G495620PF01436NHL1451670.1412.9
TkA02G495620PF06977SdiA-regulated1912230.08712.7
TkA02G495620PF01436NHL1952110.1412.9
TkA02G495620PF21959DUF69232022500.005217.3
TkA02G495620PF14289DUF43692042450.02815.7
TkA02G495620PF03088Str_synth2082560.1512.9
TkA02G495620PF03558TBSV_P222142550.2711.4
TkA02G495620PF25021TEN_NHL2222620.02614.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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