Gene Card
Gene overview
cDNA / CDS / Protein Sequences
711 bp · LXL04_021808|LXL04_021808|OH1004|cDNA
CCAGTTCTCAATTGTTTCCGTCATCGATCCCTAAACCCTAGTTTTATCCTTAGATACACACCACCGGAATCTCGAATCCGCACTTTACTAAGCGTTGCAGCTAGAGCTTCATCGAGTATGTCTGCTAATGGAGGCCAAGCTGAAAAAAACGTGGCTCAGTTTCACCTGTCTCCGACGAGTTCTCTGAAGATTCAGAAAGGCGATATCACTCGTTGGTTCATCGATGGCTCCTCCGACGCTATTGTTAATCCAGCAAATGA...
594 bp · LXL04_021808|LXL04_021808|OH1004|CDS
ATGTCTGCTAATGGAGGCCAAGCTGAAAAAAACGTGGCTCAGTTTCACCTGTCTCCGACGAGTTCTCTGAAGATTCAGAAAGGCGATATCACTCGTTGGTTCATCGATGGCTCCTCCGACGCTATTGTTAATCCAGCAAATGAGCGAATGCTTGGGGGTCGTGCTGCCGCTGGAGCTATTCATCGAGCTGCTGGCCCTGAACTTCGAACATCATGTTATGATGTTCCTGAAGTTCGTCCTGGAGTACGTTGCCCAACTGG...
Protein
Download Protein FASTA197 aa · LXL04_021808|LXL04_021808|OH1004|PROTEIN
MSANGGQAEKNVAQFHLSPTSSLKIQKGDITRWFIDGSSDAIVNPANERMLGGRAAAGAIHRAAGPELRTSCYDVPEVRPGVRCPTGEARITPGFKLPASHVIHTVGPIYDDDGNSAASLSNAYKNSLRVAREKNIQYVAFPAISCGVHGYPYDEAATVAISTIKDHCNDIKEVHLFLFSDDSYSIWVKKAQELLKN
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_021808 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_021808 |
|---|---|
| Location | Chr04:137359236-137360509 (+) |
| Description | Similar to XCC3184: Macro domain-containing protein XCC3184 (Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0019213 deacetylase activity Molecular Function GO:0061463 O-acetyl-ADP-ribose deacetylase activity Molecular Function |
| KEGG gene cross-reference | lpl:lp_3408 rso:RSc0334 vpa:VPA0103 xac:XAC3343 xcc:XCC3184 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01661.28Macro43-160 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_021808 | PF01661.28 | Macro | 43 | 160 | 1.5e-39 | 135.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.