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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_015457
Reference: OH-1004 Chr: Chr03 Coordinates: 72599788-72600399 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

477 bp · LXL04_015457|LXL04_015457|OH1004|cDNA

ATGGGTATCACTACTTATGACATGGAAATCGAAACCACAGTCCCTGCAGCCAAGTTATACCAGGCTTTCATTATTGATGGCGATACTCTTGTCCCCAAGGTTGTTCCTCAAGCAATGAAGAGCATCGACATCCTCGAAGGTGATGGTGGTGCTGGAACAATTAAGCTGATCACTTTCGGTGAAGGCAAGTCGCTAACTTCCCAATTCAAAAGCGTGAAGCACAAGATAGATGCAGTAGACAAAGAAAATATGACCTATAG...

477 bp · LXL04_015457|LXL04_015457|OH1004|CDS

ATGGGTATCACTACTTATGACATGGAAATCGAAACCACAGTCCCTGCAGCCAAGTTATACCAGGCTTTCATTATTGATGGCGATACTCTTGTCCCCAAGGTTGTTCCTCAAGCAATGAAGAGCATCGACATCCTCGAAGGTGATGGTGGTGCTGGAACAATTAAGCTGATCACTTTCGGTGAAGGCAAGTCGCTAACTTCCCAATTCAAAAGCGTGAAGCACAAGATAGATGCAGTAGACAAAGAAAATATGACCTATAG...

158 aa · LXL04_015457|LXL04_015457|OH1004|PROTEIN

MGITTYDMEIETTVPAAKLYQAFIIDGDTLVPKVVPQAMKSIDILEGDGGAGTIKLITFGEGKSLTSQFKSVKHKIDAVDKENMTYSYSIIEGDVLVDPLESISYQIHVVPTEGGCIVKNRSIYTCKGDVKIAEEDIKNGKEKALGLFKAIEAHLLAN

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_015457
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

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Basic Information and Functional Annotation

Gene IDLXL04_015457
LocationChr03:72599788-72600399 (+)
DescriptionSimilar to Major allergen Pru ar 1
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
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Functional annotation source: OH1004 · LXL04_015457 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0009813 flavonoid biosynthetic process Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0004518 nuclease activity Molecular Function
GO:0004864 protein phosphatase inhibitor activity Molecular Function
GO:0010427 abscisic acid binding Molecular Function
GO:0016787 hydrolase activity Molecular Function
GO:0038023 signaling receptor activity Molecular Function
KEGG gene cross-referenceNo functional description available

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.839
Rank 1 · LXL04_015457 · OH-1004
Nucleus0.244
Rank 2 · LXL04_015457 · OH-1004
Endoplasmic reticulum0.076
Rank 3 · LXL04_015457 · OH-1004
Cell membrane0.061
Rank 4 · LXL04_015457 · OH-1004
Mitochondrion0.050
Rank 5 · LXL04_015457 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00407.26Bet_v_11-158 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_015457PF00407.26Bet_v_111581.2e-2487.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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