Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2373 bp · LXL04_013384|LXL04_013384|OH1004|cDNA
ATGATTAAGGCTCATCTGATTTTAAGTCAGACACGCCTGATTTTTAGTAGGTTGACTGATTTTTCATCTGTTTTGACTGAGTTTAACTCTATTTGGTCTGATTTTTGGTCGGATTCCGACCCAAACCCGACCCGATCCACGACCCGGGTATTTAAACCATTAAACCCTAATTTTTCTCACTTTTCTGAAAAACGTTCCCGGCCGTTTTTTGTTCTCCATATTGCGATTTCCGACGAGAGATCCGGCGACCTCCGACCAGC...
2373 bp · LXL04_013384|LXL04_013384|OH1004|CDS
ATGATTAAGGCTCATCTGATTTTAAGTCAGACACGCCTGATTTTTAGTAGGTTGACTGATTTTTCATCTGTTTTGACTGAGTTTAACTCTATTTGGTCTGATTTTTGGTCGGATTCCGACCCAAACCCGACCCGATCCACGACCCGGGTATTTAAACCATTAAACCCTAATTTTTCTCACTTTTCTGAAAAACGTTCCCGGCCGTTTTTTGTTCTCCATATTGCGATTTCCGACGAGAGATCCGGCGACCTCCGACCAGC...
Protein
Download Protein FASTA790 aa · LXL04_013384|LXL04_013384|OH1004|PROTEIN
MIKAHLILSQTRLIFSRLTDFSSVLTEFNSIWSDFWSDSDPNPTRSTTRVFKPLNPNFSHFSEKRSRPFFVLHIAISDERSGDLRPAPTRPCPSFLHPRDLAATHTVFSGLFRRKPFFLPTRLLRRLLSPDANHSAPTSSVQLRRLLSLSRYQVPSLSSVKFLVITTIWSKKINESNVFAASPLSRYQVEETASDVETIQNSSSRVPYDQIKSQCEALVDGQQHKMSVLQSFKEQHEEETMAIVASCDDENQSSNYELEG...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_013384 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_013384 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr03:28870083-28875072 (-) | ||||||
| Description | Similar to At5g39570: Uncharacterized protein At5g39570 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0007218 neuropeptide signaling pathway Biological Process GO:0005576 extracellular region Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component GO:0009536 plastid Cellular Component GO:0003729 mRNA binding Molecular Function GO:0005184 neuropeptide hormone activity Molecular Function GO:0070300 phosphatidic acid binding Molecular Function | ||||||
| KEGG gene cross-reference | No functional description available |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q9FKA5 | Arabidopsis thaliana | Uncharacterized protein At5g39570 | 39.773% | Swiss-Prot | weak database homology |