Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1314 bp · LXL04_002320|LXL04_002320|OH1004|cDNA
ATGACCTTAAAAAAAACAGCAATATGTTTCTTGCCAAATTGTTTCAAGATTCAACAAGCGGTTCTTCCATTGAataaacccaaaaagaaatCTGCGGTTGCATCCCATAACTCTTTCCCCAGGATCTCGTTCACGGATTTAAGCAGCTCAACGCTCTCTTCAGATATATCAAATTCGCTCGCAGGTTCTAACCTCCATGTGTTCACCCTAGCCGAACTTAAGCTAATCACACAGTCGTTTTCTTCATCGAATTTCTTGGG...
1314 bp · LXL04_002320|LXL04_002320|OH1004|CDS
ATGACCTTAAAAAAAACAGCAATATGTTTCTTGCCAAATTGTTTCAAGATTCAACAAGCGGTTCTTCCATTGAATAAACCCAAAAAGAAATCTGCGGTTGCATCCCATAACTCTTTCCCCAGGATCTCGTTCACGGATTTAAGCAGCTCAACGCTCTCTTCAGATATATCAAATTCGCTCGCAGGTTCTAACCTCCATGTGTTCACCCTAGCCGAACTTAAGCTAATCACACAGTCGTTTTCTTCATCGAATTTCTTGGG...
Protein
Download Protein FASTA437 aa · LXL04_002320|LXL04_002320|OH1004|PROTEIN
MTLKKTAICFLPNCFKIQQAVLPLNKPKKKSAVASHNSFPRISFTDLSSSTLSSDISNSLAGSNLHVFTLAELKLITQSFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLEGMQGHREWLTEVIFLGELRHAHLVKLIGYCCEDEHRVLVYEYMPRGSLENQLFRRYSVSLSWSIRMKIALGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYLM...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_002320 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_002320 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:46052354-46054694 (-) | |||||||||
| Description | Similar to RIPK: Serine/threonine-protein kinase RIPK | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0002238 response to molecule of fungal origin Biological Process GO:0006468 protein phosphorylation Biological Process GO:0006952 defense response Biological Process GO:0012501 programmed cell death Biological Process GO:0032491 detection of molecule of fungal origin Biological Process GO:0042742 defense response to bacterium Biological Process GO:0050777 negative regulation of immune response Biological Process GO:0050832 defense response to fungus Biological Process GO:0062207 regulation of pattern recognition receptor signaling pathway Biological Process GO:1903428 positive regulation of reactive oxygen species biosynthetic process Biological Process GO:0005634 nucleus Cellular Component GO:0005739 mitochondrion Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT2G05940 ath:AT5G35580 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00069.32Pkinase82-355 aaPF07714.24PK_Tyr_Ser-Thr84-357 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_002320 | PF00069.32 | Pkinase | 82 | 355 | 1.7e-43 | 149.6 |
| LXL04_002320 | PF07714.24 | PK_Tyr_Ser-Thr | 84 | 357 | 1.2e-46 | 159.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.