Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkAUNG039200 | TkAUNG039200 | LXL04_027631 | 6141, 705, 4206 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 3.11482e+07 | 1.34926e+07 | 6.74629e+06 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 2.45255e+07 | 2.04328e+07 | 1.02164e+07 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 6.30778e+06 | 7.84444e+06 | 3.92222e+06 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 5.912e+06 | 1.1824e+07 | 5.912e+06 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.5815e+06 | 5.163e+06 | 2.5815e+06 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.14184e+07 | 1.28005e+07 | 6.40023e+06 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 569800 | 667431 | 333715 | 4 | LFQ intensity |
TkAUNG039200 | 6141 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 9.6918e+06 | 1.05409e+07 | 5.27043e+06 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 4.56315e+08 | 9.02274e+07 | 4.51137e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.87122e+08 | 7.29216e+07 | 3.64608e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 4.47332e+08 | 5.20902e+07 | 2.60451e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 3.77468e+08 | 6.55253e+07 | 3.27627e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.90635e+08 | 2.57538e+07 | 1.28769e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 4.46005e+08 | 2.68824e+07 | 1.34412e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.1209e+08 | 4.26451e+07 | 2.13225e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.62015e+08 | 6.63691e+07 | 3.31846e+07 | 4 | LFQ intensity |
TkAUNG039200 | 705 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 2.83038e+08 | 5.18726e+07 | 2.59363e+07 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 3.78332e+07 | 1.99306e+07 | 9.96528e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 3.928e+07 | 2.34626e+07 | 1.17313e+07 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 3.88842e+07 | 1.76697e+07 | 8.83483e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 4.37188e+07 | 1.84485e+07 | 9.22424e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.93585e+07 | 4.45627e+06 | 2.22813e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.6949e+07 | 6.43133e+06 | 3.21567e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 4.4522e+07 | 1.53397e+07 | 7.66983e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 3.18918e+07 | 1.46943e+07 | 7.34715e+06 | 4 | LFQ intensity |
TkAUNG039200 | 4206 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.51845e+07 | 1.87507e+07 | 9.37533e+06 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 29421000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 22828000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 21621000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 50723000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 21864000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 26407000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 49831000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 16183000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 9048100.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 23648000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 10326000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 30118000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 34574000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 9080600.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 11901000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 1276900.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 1002300.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 7319800.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 24696000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 6141 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 6751400.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 418310000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 490690000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 353750000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 562510000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 407710000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 573650000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 516230000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 450900000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 378950000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 500530000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 471030000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 438820000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 304950000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 339090000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 432580000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 433250000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 290460000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 295050000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 257200000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 319830000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 467790000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 456240000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 406800000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 453190000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 243910000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 170850000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 253530000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 180070000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 285360000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 243450000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 338090000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 181160000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 346440000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 302170000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 229930000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 705 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 253610000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 50923000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 27455000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 57796000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 15159000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 19269000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 33401000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 73217000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 31233000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 65363000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 29355000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 31143000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 29676000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 62802000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 18736000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 43900000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 49437000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 31949000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 27987000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 23737000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 33761000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 36452000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 24986000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 22313000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 24045000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 41533000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 36244000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 33348000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 66963000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 16966000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 30736000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 27801000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 52064000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 38508000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 22230000.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkAUNG039200 | 4206 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkAUNG039200
Protein group 6141 · Peptides: 23 · Unique peptides: 1 · Sequence coverage: 25.5%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg3666.10|evm.TU.utg3666.10|utg3666|GWHAAAA00004354.:24583-24590,
Protein group 705 · Peptides: 24 · Unique peptides: 2 · Sequence coverage: 24.7%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg11656.7|evm.TU.utg11656.7|utg11656|GWHAAAA00001461.:24915-25132,
Protein group 4206 · Peptides: 4 · Unique peptides: 3 · Sequence coverage: 10.6%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg23299.3|evm.TU.utg23299.3|utg23299|GWHAAAA00023699.:12720-12750,;evm.model.utg25172.2|evm.TU.utg25172.2|utg25172|GWHAAAA00028847.:14004-14042,;evm.model.utg3666.11|evm.TU.utg3666.11|utg3666|GWHAAAA00004354.:35178-35220,;evm.model.utg11656.8|evm.TU.utg11656.8|utg11656|GWHAAAA00001461.:35230-35272,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |