Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA08G134920 | TkA08G134920 | LXL04_031894 | 1840, 1841, 8330 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 7.95502e+07 | 2.18922e+07 | 1.09461e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 6.17198e+07 | 7.68643e+06 | 3.84321e+06 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 4.72174e+07 | 3.45018e+07 | 1.72509e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 3.72015e+07 | 2.32795e+07 | 1.16398e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 5.5195e+07 | 3.32914e+07 | 1.66457e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 7.72395e+07 | 2.0752e+07 | 1.0376e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.22942e+08 | 8.43916e+07 | 4.21958e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.69808e+08 | 4.75391e+07 | 2.37695e+07 | 4 | LFQ intensity |
TkA08G134920 | 1840 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.58062e+08 | 8.06119e+07 | 4.03059e+07 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.1664e+06 | 2.99979e+06 | 1.49989e+06 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 5.12528e+06 | 4.00864e+06 | 2.00432e+06 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.47252e+07 | 5.71872e+06 | 2.85936e+06 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.98912e+07 | 9.40785e+06 | 4.70392e+06 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 3.23388e+07 | 7.70296e+06 | 3.85148e+06 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.49954e+08 | 7.53174e+07 | 3.76587e+07 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 7.12258e+07 | 1.98678e+07 | 9.9339e+06 | 4 | LFQ intensity |
TkA08G134920 | 1841 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 3.11256e+07 | 1.57045e+07 | 7.85223e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.18865e+06 | 2.56641e+06 | 1.28321e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.0197e+07 | 1.20474e+07 | 6.02371e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 9.6598e+06 | 7.63861e+06 | 3.81931e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.13838e+07 | 8.68968e+06 | 4.34484e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.59472e+07 | 1.92468e+07 | 9.62339e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 3.31895e+07 | 9.22214e+06 | 4.61107e+06 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.30578e+08 | 4.78375e+07 | 2.39188e+07 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 6.7748e+07 | 5.51267e+07 | 2.75633e+07 | 4 | LFQ intensity |
TkA08G134920 | 8330 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 3.92095e+07 | 2.41325e+07 | 1.20662e+07 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 95637000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 86902000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 88450000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 47212000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 53821000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 63507000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 57957000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 71594000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 8661500.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 28719000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 83320000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 68169000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 23703000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 66901000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 43769000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 14433000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 39966000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 18606000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 66756000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 95452000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 74284000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 105290000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 55166000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 74218000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 180140000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 309720000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 126670000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 275240000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 156710000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 171940000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 118090000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 232490000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 82367000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 132930000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 271920000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1840 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 145030000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 5277400.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 7060700.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 4327500.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 8116800.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 3877700.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 8506600.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 14136000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 17215000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 20474000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 7075600.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 19087000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 14709000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 12394000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 33375000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 29487000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 28583000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 27459000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 43826000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 56957000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 224960000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 123020000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 194880000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 98836000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 60695000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 53600000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 71772000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 42261000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 8949600.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 31026000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 1841 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 42266000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 4924400.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 3830200.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 23517000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 17271000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 6720000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 6505400.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 4403800.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 21010000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 34222000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 18250000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 18081000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 14982000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 26136000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 21299000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 4942000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 51412000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 22494000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 34382000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 31079000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 44803000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 65653000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 135440000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 180890000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 140330000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 146820000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 64199000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 29904000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 30069000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 37559000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 10104000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 40022000.0 | LFQ intensity | PXD011773 |
TkA08G134920 | 8330 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 69153000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA08G134920
Protein group 1840 · Peptides: 15 · Unique peptides: 14 · Sequence coverage: 34.0%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg14641.1|evm.TU.utg14641.1|utg14641|GWHAAAA00028285.:8947-9561,;evm.model.utg29004.7|evm.TU.utg29004.7|utg29004|GWHAAAA00013062.:9421-9609:-|Frame:;evm.model.utg5886.6|evm.TU.utg5886.6|utg5886|GWHAAAA00014741.:27049-27243:-|Frame:
Protein group 1841 · Peptides: 3 · Unique peptides: 3 · Sequence coverage: 16.7%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg14641.2|evm.TU.utg14641.2|utg14641|GWHAAAA00028285.:14512-15108:-|Frame:;evm.model.utg12353.18|evm.TU.utg12353.18|utg12353|GWHAAAA00006926.:63392-63445,;evm.model.utg32618.3|evm.TU.utg32618.3|utg32618|GWHAAAA00030370.:11071-11394:+|Frame:;evm.model.utg15085.2|evm.TU.utg15085.2|utg15085|GWHAAAA00029617.:23932-24459:-|Frame:
Protein group 8330 · Peptides: 6 · Unique peptides: 6 · Sequence coverage: 26.0%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg8200.30|evm.TU.utg8200.30|utg8200|GWHAAAA00010122.:141939-142637,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |