Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA06G045590 | TkA06G045590 | LXL04_025685 | 8609, 8606, 7022 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 8.13875e+06 | 1.62775e+07 | 8.13875e+06 | 4 | LFQ intensity |
TkA06G045590 | 8609 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 6.44975e+07 | 6.99604e+07 | 3.49802e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 8.95309e+07 | 1.02359e+08 | 5.11796e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.15566e+08 | 8.77216e+07 | 4.38608e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.11752e+08 | 1.70547e+08 | 8.52733e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 8.60272e+07 | 6.55214e+07 | 3.27607e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 7.8442e+07 | 4.29799e+07 | 2.149e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 4.78235e+07 | 3.56798e+07 | 1.78399e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.38972e+07 | 4.77945e+07 | 2.38972e+07 | 4 | LFQ intensity |
TkA06G045590 | 8606 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 7.52294e+07 | 1.48991e+08 | 7.44954e+07 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.84685e+06 | 3.6937e+06 | 1.84685e+06 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 719000 | 1.438e+06 | 719000 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.6321e+06 | 4.31941e+06 | 2.15971e+06 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 9.72e+06 | 1.22978e+07 | 6.14889e+06 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.3202e+06 | 2.6404e+06 | 1.3202e+06 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G045590 | 7022 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.3249e+06 | 2.6498e+06 | 1.3249e+06 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 32555000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8609 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 8190000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 119610000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 130190000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 121460000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 9617100.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 6576400.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 220470000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 95156000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 209550000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 262070000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 295490000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 139460000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 281200000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 409650000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 16699000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 102150000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 158230000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 83729000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 102030000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 97049000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 14049000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 100640000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 61445000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 45410000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 84439000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 95589000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 298710000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 8606 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 2207400.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 7387400.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 2876000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 1505200.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 9023200.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 25596000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 13284000.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 5280800.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 5299600.0 | LFQ intensity | PXD011773 |
TkA06G045590 | 7022 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA06G045590
Protein group 8609 · Peptides: 11 · Unique peptides: 1 · Sequence coverage: 26.8%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg8915.2|evm.TU.utg8915.2|utg8915|GWHAAAA00002468.:7362-8963:-|Frame:;evm.model.utg8915.3|evm.TU.utg8915.3|utg8915|GWHAAAA00002468.:10858-12402:-|Frame:
Protein group 8606 · Peptides: 13 · Unique peptides: 0 · Sequence coverage: 27.0%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg8915.1|evm.TU.utg8915.1|utg8915|GWHAAAA00002468.:3866-5467:-|Frame:;evm.model.utg14642.2|evm.TU.utg14642.2|utg14642|GWHAAAA00017618.:27822-29387:+|Frame:
Protein group 7022 · Peptides: 4 · Unique peptides: 1 · Sequence coverage: 7.8%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg5238.6|evm.TU.utg5238.6|utg5238|GWHAAAA00007327.:32730-34232:-|Frame:
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |