Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G597650 | TkA01G597650 | LXL04_036743 | 3623, 4041, 7098 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.2339e+09 | 3.84279e+07 | 1.9214e+07 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 2.17972e+09 | 1.42765e+08 | 7.13826e+07 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.08662e+09 | 2.94684e+08 | 1.47342e+08 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.56468e+09 | 2.04301e+08 | 1.0215e+08 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.57505e+09 | 1.41457e+08 | 7.07285e+07 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.5834e+09 | 1.87389e+08 | 9.36945e+07 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 3.06785e+09 | 3.65692e+08 | 1.82846e+08 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.56592e+09 | 1.86996e+08 | 9.34981e+07 | 4 | LFQ intensity |
TkA01G597650 | 3623 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 3.03682e+09 | 5.21944e+08 | 2.60972e+08 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 4.49745e+07 | 3.86036e+07 | 1.93018e+07 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 7.66178e+07 | 3.2644e+07 | 1.6322e+07 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 6.06e+07 | 2.40889e+07 | 1.20445e+07 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 5.86515e+07 | 3.2784e+07 | 1.6392e+07 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.50892e+07 | 9.59694e+06 | 4.79847e+06 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.74085e+07 | 1.66951e+07 | 8.34757e+06 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 3.28155e+07 | 2.8457e+07 | 1.42285e+07 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.95945e+07 | 2.26991e+07 | 1.13495e+07 | 4 | LFQ intensity |
TkA01G597650 | 4041 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 4.14255e+07 | 3.15827e+07 | 1.57914e+07 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.32695e+07 | 1.64905e+07 | 8.24525e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.31832e+07 | 1.60931e+07 | 8.04657e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 1.9599e+07 | 4.14908e+06 | 2.07454e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 5.1965e+06 | 1.0393e+07 | 5.1965e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.45435e+07 | 1.2183e+07 | 6.09148e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 9.90325e+06 | 6.77655e+06 | 3.38827e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.98305e+07 | 2.80569e+06 | 1.40285e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.86882e+07 | 1.60886e+07 | 8.04428e+06 | 4 | LFQ intensity |
TkA01G597650 | 7098 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.97962e+07 | 9.27885e+06 | 4.63942e+06 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 2213400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 2205400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 2290000000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 2226800000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 2230500000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 2303500000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 2210800000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 1974100000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 2371000000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 1673800000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 2128800000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 2172900000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 2758300000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 2468100000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 2324200000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 2708100000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 2373400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 2580400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 2679200000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 2667200000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 2523800000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 2496400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 2861000000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 2452400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 2679000000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 3277000000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 2849400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 3466000000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 2782600000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 2605600000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 2329300000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 2546200000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 2657100000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 3114200000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 2630600000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 3623 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 3745400000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 14665000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 93002000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 12787000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 59444000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 86200000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 38712000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 115950000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 65609000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 64584000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 40934000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 93091000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 43791000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 100580000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 68607000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 35972000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 29447000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 37024000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 23380000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 13705000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 26248000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 22889000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 22478000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 12810000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 51457000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 20900000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 20065000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 14977000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 75320000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 39741000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 7123000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 56516000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 14998000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 12580000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 82607000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 49192000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 4041 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 21323000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 15365000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 10962000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 19276000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 47475000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 10759000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 5567700.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 36406000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 18241000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 23504000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 22282000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 14369000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 20786000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 1083900.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 30632000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 12276000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 14182000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 11074000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 14579000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 13960000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 16635000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 20770000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 18725000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 23192000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 7788000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 28427000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 31662000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 46876000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 28720000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 12060000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 11518000.0 | LFQ intensity | PXD011773 |
TkA01G597650 | 7098 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 26887000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G597650
Protein group 3623 · Peptides: 24 · Unique peptides: 20 · Sequence coverage: 35.7%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg20606.5|evm.TU.utg20606.5|utg20606|GWHAAAA00000710.:21373-21556,;evm.model.utg23037.4|evm.TU.utg23037.4|utg23037|GWHAAAA00020100.:9606-9789,;evm.model.utg29572.5|evm.TU.utg29572.5|utg29572|GWHAAAA00028858.:14689-14909,
Protein group 4041 · Peptides: 11 · Unique peptides: 7 · Sequence coverage: 20.9%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg2265.3|evm.TU.utg2265.3|utg2265|GWHAAAA00018117.:11934-12123,
Protein group 7098 · Peptides: 6 · Unique peptides: 4 · Sequence coverage: 11.8%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg5392.2|evm.TU.utg5392.2|utg5392|GWHAAAA00016664.:9711-9794,;evm.model.utg31761.1|evm.TU.utg31761.1|utg31761|GWHAAAA00022206.:3659-3862,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |