Proteomics query

Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.

3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates

Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.

Examples

Transcript expression query

Download selected abundance datasets and queried genes (TSV) · 144 abundance records

Root proteomes of latex-exuding and non-exuding plants · LFQ intensity

Source accession: PRIDE PXD011773
Paper: View study design
Samples and quantification: 36 LFQ experiments · 9040 protein groups · MaxQuant
Species: Rubber dandelion (Taraxacum koksaghyz)
Sample tissue/type: Root tissue (whole-root protein extract)
Treatment/comparison: Compare latex-exuding controls, latex-exuding barstar controls and non-exuding barnase/barstar plants at three developmental ages.
Sampling age: 8, 12 and 24 weeks old
Groups and replicates: Four biological replicates per age and genotype: 3 genotypes x 3 ages x 4 replicates = 36 quantified samples.
Material/groupGroup meaning
Latex-exuding controlLatex-exuding background control; archived as WT.
Latex-exuding transgenic controlBarstar-only transgenic control that exudes latex.
Non-exuding lineBarnase/barstar double-transgenic plants that do not exude latex.

LFQ quantification is at the protein-group level. Cross-version gene mappings retain evidence tiers and do not establish unique protein identification. Source zeros are retained and do not establish protein absence.

ID Resolution

Input IDDisplay IDLinked lookup IDProtein groupsValuesStatus
TkA01G206750TkA01G206750LXL04_0145335722, 4018, 5089, 6620144Resolved

Group Summary

Download current dataset and queried genes (TSV)

Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.

TkA01G206750 · 8 weeks old Latex-exuding control · Group 57225.22e+08
TkA01G206750 · 8 weeks old Latex-exuding transgenic control · Group 57224.44e+08
TkA01G206750 · 8 weeks old Non-exuding line · Group 57225.74e+08
TkA01G206750 · 12 weeks old Latex-exuding control · Group 57229.96e+08
TkA01G206750 · 12 weeks old Latex-exuding transgenic control · Group 57229.12e+08
TkA01G206750 · 12 weeks old Non-exuding line · Group 57228.69e+08
TkA01G206750 · 24 weeks old Latex-exuding control · Group 57221.75e+09
TkA01G206750 · 24 weeks old Latex-exuding transgenic control · Group 57221.57e+09
TkA01G206750 · 24 weeks old Non-exuding line · Group 57221.2e+09
TkA01G206750 · 8 weeks old Latex-exuding control · Group 40182.25e+08
TkA01G206750 · 8 weeks old Latex-exuding transgenic control · Group 40182.47e+08
TkA01G206750 · 8 weeks old Non-exuding line · Group 40183.09e+08
TkA01G206750 · 12 weeks old Latex-exuding control · Group 40183.17e+08
TkA01G206750 · 12 weeks old Latex-exuding transgenic control · Group 40182.62e+08
TkA01G206750 · 12 weeks old Non-exuding line · Group 40182.41e+08
TkA01G206750 · 24 weeks old Latex-exuding control · Group 40184.29e+08
TkA01G206750 · 24 weeks old Latex-exuding transgenic control · Group 40184.79e+08
TkA01G206750 · 24 weeks old Non-exuding line · Group 40183.55e+08
TkA01G206750 · 8 weeks old Latex-exuding control · Group 50892.96e+08
TkA01G206750 · 8 weeks old Latex-exuding transgenic control · Group 50893.27e+08
TkA01G206750 · 8 weeks old Non-exuding line · Group 50892.74e+08
TkA01G206750 · 12 weeks old Latex-exuding control · Group 50893.69e+08
TkA01G206750 · 12 weeks old Latex-exuding transgenic control · Group 50893.9e+08
TkA01G206750 · 12 weeks old Non-exuding line · Group 50892.38e+08
TkA01G206750 · 24 weeks old Latex-exuding control · Group 50894.12e+08
TkA01G206750 · 24 weeks old Latex-exuding transgenic control · Group 50892.92e+08
TkA01G206750 · 24 weeks old Non-exuding line · Group 50893.11e+08
TkA01G206750 · 8 weeks old Latex-exuding control · Group 66205.43e+09
TkA01G206750 · 8 weeks old Latex-exuding transgenic control · Group 66205.64e+09
TkA01G206750 · 8 weeks old Non-exuding line · Group 66204.68e+09
TkA01G206750 · 12 weeks old Latex-exuding control · Group 66206.88e+09
TkA01G206750 · 12 weeks old Latex-exuding transgenic control · Group 66208.96e+09
TkA01G206750 · 12 weeks old Non-exuding line · Group 66207.3e+09
TkA01G206750 · 24 weeks old Latex-exuding control · Group 66201.08e+10
TkA01G206750 · 24 weeks old Latex-exuding transgenic control · Group 66201.05e+10
TkA01G206750 · 24 weeks old Non-exuding line · Group 66205.81e+09
Gene / protein IDProtein groupTissue/sampleMaterial/groupSampling ageMean intensitySDSEnUnit
TkA01G2067505722Root tissue (whole-root protein extract)Latex-exuding control8 weeks old5.2204e+081.90597e+089.52983e+074LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old4.44e+081.43703e+087.18514e+074LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Non-exuding line8 weeks old5.74198e+082.51136e+081.25568e+084LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Latex-exuding control12 weeks old9.95848e+083.21483e+081.60742e+084LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old9.1219e+082.16433e+081.08217e+084LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Non-exuding line12 weeks old8.69035e+089.38155e+074.69077e+074LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Latex-exuding control24 weeks old1.75372e+091.81049e+089.05244e+074LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old1.57222e+091.77474e+088.87371e+074LFQ intensity
TkA01G2067505722Root tissue (whole-root protein extract)Non-exuding line24 weeks old1.2034e+092.5266e+081.2633e+084LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Latex-exuding control8 weeks old2.25162e+089.53671e+074.76835e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old2.47215e+081.12722e+085.6361e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Non-exuding line8 weeks old3.08702e+088.97903e+074.48951e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Latex-exuding control12 weeks old3.16582e+089.77503e+074.88752e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old2.62405e+089.03851e+074.51925e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Non-exuding line12 weeks old2.41015e+082.83517e+071.41758e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Latex-exuding control24 weeks old4.2882e+084.3204e+072.1602e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old4.79028e+081.16525e+085.82625e+074LFQ intensity
TkA01G2067504018Root tissue (whole-root protein extract)Non-exuding line24 weeks old3.55165e+084.33149e+072.16575e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Latex-exuding control8 weeks old2.96392e+081.04632e+085.23158e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old3.26708e+089.28675e+074.64337e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Non-exuding line8 weeks old2.74385e+089.91732e+074.95866e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Latex-exuding control12 weeks old3.69068e+088.97379e+074.48689e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old3.89775e+081.58348e+087.9174e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Non-exuding line12 weeks old2.38095e+083.9065e+071.95325e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Latex-exuding control24 weeks old4.12442e+081.07537e+085.37684e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old2.92372e+089.85235e+074.92617e+074LFQ intensity
TkA01G2067505089Root tissue (whole-root protein extract)Non-exuding line24 weeks old3.11278e+087.07119e+073.5356e+074LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Latex-exuding control8 weeks old5.43e+091.23807e+096.19035e+084LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old5.64395e+091.41788e+097.0894e+084LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Non-exuding line8 weeks old4.67578e+091.42043e+097.10217e+084LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Latex-exuding control12 weeks old6.87742e+098.10703e+084.05352e+084LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old8.96002e+092.68057e+091.34029e+094LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Non-exuding line12 weeks old7.29942e+093.29785e+081.64893e+084LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Latex-exuding control24 weeks old1.08213e+101.25341e+096.26705e+084LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old1.04829e+102.69163e+091.34582e+094LFQ intensity
TkA01G2067506620Root tissue (whole-root protein extract)Non-exuding line24 weeks old5.80722e+098.39038e+084.19519e+084LFQ intensity

Sample-Level Protein Abundance

Gene / protein IDProtein groupSampleTissue/sampleMaterial/groupSampling ageReplicateAbundanceUnitSource
TkA01G20675057228 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 1649750000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 2333010000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 3718620000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4386780000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1388040000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 2581040000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 3267900000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 4539020000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1945270000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 2485450000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 3476530000.0LFQ intensityPXD011773
TkA01G20675057228 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 4389540000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 11412300000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 21011800000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 3633220000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 4926070000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 1813850000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 2964070000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 31187500000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 4683340000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1964550000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2931890000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 3809720000.0LFQ intensityPXD011773
TkA01G206750572212 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 4769980000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 11845800000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 21855900000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 31482600000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 41830600000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 11606800000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 21317300000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 31637500000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 41727300000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 11360300000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 2826190000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 31300500000.0LFQ intensityPXD011773
TkA01G206750572224 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 41326600000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 1276370000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 2139460000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 3333850000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4150970000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1170510000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 2369380000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 3134270000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 4314700000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1421890000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 2305270000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 3305500000.0LFQ intensityPXD011773
TkA01G20675040188 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 4202150000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 1435350000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 2353170000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 3214890000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 4262920000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 1238840000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 2357460000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 3305280000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 4148040000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1210020000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2253380000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 3226620000.0LFQ intensityPXD011773
TkA01G206750401812 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 4274040000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 1465370000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 2429440000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 3367970000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4452500000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 1562750000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 2306880000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 3532740000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 4513740000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 1307870000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 2343260000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 3412130000.0LFQ intensityPXD011773
TkA01G206750401824 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 4357400000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 1253540000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 2238400000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 3453020000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4240610000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1269160000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 2241320000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 3347900000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 4448450000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1405490000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 2293190000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 3180360000.0LFQ intensityPXD011773
TkA01G20675050898 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 4218500000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 1487780000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 2283150000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 3319910000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 4385430000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 1406580000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 2583100000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 3372710000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 4196710000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1263490000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2179870000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 3255970000.0LFQ intensityPXD011773
TkA01G206750508912 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 4253050000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 1390090000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 2448680000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 3277470000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4533530000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 1243760000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 2177040000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 3377250000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 4371440000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 1410770000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 2273990000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 3250370000.0LFQ intensityPXD011773
TkA01G206750508924 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 4309980000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 16472000000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 23925400000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 36416900000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 44905700000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 15106000000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 27571300000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 34220600000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 45677900000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 16144600000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 25509900000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 33000900000.0LFQ intensityPXD011773
TkA01G20675066208 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 44047700000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 16665600000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 27496700000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 35819200000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 47528200000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 16385200000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 210514000000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 311919000000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 47021900000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 17467600000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 26941900000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 37670000000.0LFQ intensityPXD011773
TkA01G206750662012 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 47118200000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 111277000000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 211813000000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 38985300000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 411210000000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 114123000000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 210817000000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 38983200000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 48008300000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 15863100000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 26588800000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 36145900000.0LFQ intensityPXD011773
TkA01G206750662024 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 44631100000.0LFQ intensityPXD011773
Data source and protein identification

PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files

Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.

Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.

TkA01G206750

Protein group 5722 · Peptides: 8 · Unique peptides: 7 · Sequence coverage: 60.3%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg3303.16|evm.TU.utg3303.16|utg3303|GWHAAAA00008881.:151993-152124,

Protein group 4018 · Peptides: 8 · Unique peptides: 7 · Sequence coverage: 63.0%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg22564.5|evm.TU.utg22564.5|utg22564|GWHAAAA00019246.:20162-20279,

Protein group 5089 · Peptides: 5 · Unique peptides: 5 · Sequence coverage: 51.6%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg28541.4|evm.TU.utg28541.4|utg28541|GWHAAAA00010437.:10354-10492,

Protein group 6620 · Peptides: 21 · Unique peptides: 15 · Sequence coverage: 99.4%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg4464.3|evm.TU.utg4464.3|utg4464|GWHAAAA00000156.:17100-17480,;evm.model.utg2308.38|evm.TU.utg2308.38|utg2308|GWHAAAA00015466.:198832-198903,

Sample design and raw-file catalogue
ExperimentSampling ageMaterial/groupReplicateRaw files
PAP738 weeks oldLatex-exuding controlBiological replicate 13
PAP748 weeks oldLatex-exuding controlBiological replicate 23
PAP758 weeks oldLatex-exuding controlBiological replicate 33
PAP768 weeks oldLatex-exuding controlBiological replicate 43
PAP778 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP788 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP798 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP808 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP818 weeks oldNon-exuding lineBiological replicate 13
PAP828 weeks oldNon-exuding lineBiological replicate 23
PAP838 weeks oldNon-exuding lineBiological replicate 33
PAP848 weeks oldNon-exuding lineBiological replicate 43
PAP8512 weeks oldLatex-exuding controlBiological replicate 13
PAP8612 weeks oldLatex-exuding controlBiological replicate 23
PAP8712 weeks oldLatex-exuding controlBiological replicate 33
PAP8812 weeks oldLatex-exuding controlBiological replicate 43
PAP8912 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP9012 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP9112 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP9212 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP9312 weeks oldNon-exuding lineBiological replicate 13
PAP9412 weeks oldNon-exuding lineBiological replicate 23
PAP9512 weeks oldNon-exuding lineBiological replicate 33
PAP9612 weeks oldNon-exuding lineBiological replicate 43
PAP9724 weeks oldLatex-exuding controlBiological replicate 13
PAP9824 weeks oldLatex-exuding controlBiological replicate 23
PAP9924 weeks oldLatex-exuding controlBiological replicate 33
PAP10024 weeks oldLatex-exuding controlBiological replicate 43
PAP10124 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP10224 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP10324 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP10424 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP10524 weeks oldNon-exuding lineBiological replicate 13
PAP10624 weeks oldNon-exuding lineBiological replicate 23
PAP10724 weeks oldNon-exuding lineBiological replicate 33
PAP10824 weeks oldNon-exuding lineBiological replicate 43