Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G023840 | TkA01G023840 | LXL04_005687 | 2190, 3394, 8751 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 5.93925e+09 | 2.81058e+08 | 1.40529e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 5.84405e+09 | 5.64057e+08 | 2.82029e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 5.83858e+09 | 6.96926e+08 | 3.48463e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 5.67602e+09 | 6.64247e+08 | 3.32124e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 5.7053e+09 | 8.81768e+07 | 4.40884e+07 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 5.45632e+09 | 3.85e+08 | 1.925e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 5.38565e+09 | 3.21293e+08 | 1.60647e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 5.7016e+09 | 7.35138e+08 | 3.67569e+08 | 4 | LFQ intensity |
TkA01G023840 | 2190 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 4.87482e+09 | 2.27786e+08 | 1.13893e+08 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.25418e+08 | 1.91126e+07 | 9.55628e+06 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 9.6841e+07 | 2.64665e+07 | 1.32332e+07 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 1.24395e+08 | 5.09995e+06 | 2.54998e+06 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.22193e+08 | 3.72881e+07 | 1.86441e+07 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.6357e+08 | 3.1716e+07 | 1.5858e+07 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.39172e+08 | 3.00448e+07 | 1.50224e+07 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.96935e+08 | 3.46743e+07 | 1.73372e+07 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.24572e+08 | 3.86635e+07 | 1.93317e+07 | 4 | LFQ intensity |
TkA01G023840 | 3394 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.453e+08 | 2.53196e+07 | 1.26598e+07 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 3.2565e+06 | 6.513e+06 | 3.2565e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.42145e+06 | 2.8429e+06 | 1.42145e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 6.32675e+06 | 1.26535e+07 | 6.32675e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 4.60832e+06 | 3.25489e+06 | 1.62744e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.24092e+07 | 1.30069e+07 | 6.50347e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 9.89782e+06 | 1.63341e+07 | 8.16706e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 4.7435e+06 | 9.487e+06 | 4.7435e+06 | 4 | LFQ intensity |
TkA01G023840 | 8751 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.2255e+07 | 8.52748e+06 | 4.26374e+06 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 5775000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 6317700000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 5684100000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 5980200000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 5413200000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 5301600000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 6352400000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 6309000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 5487600000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 5258200000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 6835000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 5773500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 5964200000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 6300100000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 4753500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 5686300000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 5725600000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 5614500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 5662500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 5818600000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 5212800000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 6029500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 5326900000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 5256100000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 5236200000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 5101800000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 5839900000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 5364700000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 5899000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 5592000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 6542700000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 4772700000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 5059500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 4554000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 4874500000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 2190 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 5011300000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 113320000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 146750000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 105770000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 135830000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 84364000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 132260000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 70740000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 100000000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 121760000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 126630000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 118850000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 130340000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 168840000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 116800000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 77952000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 125180000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 120400000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 162020000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 177220000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 194640000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 181970000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 135880000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 125950000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 112890000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 222400000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 214060000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 145990000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 205290000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 235660000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 261360000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 170120000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 231150000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 165080000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 151380000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 156460000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 3394 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 108280000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 13026000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 5685800.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 25307000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 7557200.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 4951500.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 5924600.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 7296600.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 30495000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 11845000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 34088000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 5503300.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 18974000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 19531000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 13597000.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G023840 | 8751 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 15892000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G023840
Protein group 2190 · Peptides: 28 · Unique peptides: 4 · Sequence coverage: 75.5%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg1586.22|evm.TU.utg1586.22|utg1586|GWHAAAA00014486.:99986-100247,
Protein group 3394 · Peptides: 21 · Unique peptides: 1 · Sequence coverage: 78.0%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg21700.2|evm.TU.utg21700.2|utg21700|GWHAAAA00002790.:13581-13842,;evm.model.utg19854.2|evm.TU.utg19854.2|utg19854|GWHAAAA00031147.:1566-2233,
Protein group 8751 · Peptides: 7 · Unique peptides: 1 · Sequence coverage: 49.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg9180.4|evm.TU.utg9180.4|utg9180|GWHAAAA00014098.:20210-20584,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |