Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G004390 | TkA01G004390 | LXL04_004575 | 2944, 1640 | 72 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.21857e+09 | 5.2128e+08 | 2.6064e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.33523e+09 | 5.30023e+08 | 2.65011e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 1.37846e+09 | 6.40097e+08 | 3.20049e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.26695e+09 | 6.13731e+08 | 3.06866e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.9217e+09 | 4.47303e+08 | 2.23651e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.34242e+09 | 4.36834e+08 | 2.18417e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.55472e+09 | 2.85926e+08 | 1.42963e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.8176e+09 | 7.5953e+08 | 3.79765e+08 | 4 | LFQ intensity |
TkA01G004390 | 2944 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 2.78832e+09 | 6.84096e+08 | 3.42048e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 4.09572e+09 | 1.25389e+09 | 6.26947e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 2.84685e+09 | 4.83549e+08 | 2.41774e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 5.05288e+09 | 1.9507e+09 | 9.7535e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 4.64815e+09 | 7.59202e+08 | 3.79601e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 4.95222e+09 | 1.68362e+09 | 8.41812e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 6.8054e+09 | 2.11685e+09 | 1.05842e+09 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 8.17548e+09 | 7.02826e+08 | 3.51413e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 5.46802e+09 | 1.55114e+09 | 7.75572e+08 | 4 | LFQ intensity |
TkA01G004390 | 1640 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.01752e+10 | 3.45418e+09 | 1.72709e+09 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 810450000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 1132100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 1975200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 956520000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 753710000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 1698100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 1026800000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 1862300000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 2270200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 1124600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 1347700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 771350000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 2067500000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 2318700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 1607100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 3074500000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 2468200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 2104700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 1525300000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 1588600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 2973400000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 2252300000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 2171900000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 1972100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 2131100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 2649000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 2756000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 2682800000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 3084100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 1737100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 3508200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 2941000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 2168700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 2259200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 3162400000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 2944 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 3563000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 2873600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 3731100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 5846000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 3932200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 2754100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 3527400000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 2384200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 2721700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 6521600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 6948700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 3324300000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 3416900000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 4306100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 4167900000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 4337000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 5781600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 4384200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 4273700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 7438800000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 3712200000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 6753600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 5440400000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 9813100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 5214500000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 8081000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 8783700000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 7221800000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 8615400000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 4724000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 3918500000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 7518500000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 5711100000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 7945400000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 15238000000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 9525600000.0 | LFQ intensity | PXD011773 |
TkA01G004390 | 1640 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 7991600000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G004390
Protein group 2944 · Peptides: 7 · Unique peptides: 7 · Sequence coverage: 49.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg18288.5|evm.TU.utg18288.5|utg18288|GWHAAAA00005428.:36477-36759,;evm.model.utg4.6|evm.TU.utg4.6|utg4|GWHAAAA00012341.:30563-30588,
Protein group 1640 · Peptides: 12 · Unique peptides: 12 · Sequence coverage: 90.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg14139.1|evm.TU.utg14139.1|utg14139|GWHAAAA00001116.:6726-6798,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |