Proteomics query

Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.

3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates

Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.

Examples

Transcript expression query

Download selected abundance datasets and queried genes (TSV) · 144 abundance records

Root proteomes of latex-exuding and non-exuding plants · LFQ intensity

Source accession: PRIDE PXD011773
Paper: View study design
Samples and quantification: 36 LFQ experiments · 9040 protein groups · MaxQuant
Species: Rubber dandelion (Taraxacum koksaghyz)
Sample tissue/type: Root tissue (whole-root protein extract)
Treatment/comparison: Compare latex-exuding controls, latex-exuding barstar controls and non-exuding barnase/barstar plants at three developmental ages.
Sampling age: 8, 12 and 24 weeks old
Groups and replicates: Four biological replicates per age and genotype: 3 genotypes x 3 ages x 4 replicates = 36 quantified samples.
Material/groupGroup meaning
Latex-exuding controlLatex-exuding background control; archived as WT.
Latex-exuding transgenic controlBarstar-only transgenic control that exudes latex.
Non-exuding lineBarnase/barstar double-transgenic plants that do not exude latex.

LFQ quantification is at the protein-group level. Cross-version gene mappings retain evidence tiers and do not establish unique protein identification. Source zeros are retained and do not establish protein absence.

ID Resolution

Input IDDisplay IDLinked lookup IDProtein groupsValuesStatus
TkA06G011220TkA06G011220LXL04_0264657838, 7837, 897, 8250144Resolved

Group Summary

Download current dataset and queried genes (TSV)

Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.

TkA06G011220 · 8 weeks old Latex-exuding control · Group 78382.22e+08
TkA06G011220 · 8 weeks old Latex-exuding transgenic control · Group 78382.62e+08
TkA06G011220 · 8 weeks old Non-exuding line · Group 78382.81e+08
TkA06G011220 · 12 weeks old Latex-exuding control · Group 78382.08e+08
TkA06G011220 · 12 weeks old Latex-exuding transgenic control · Group 78382.56e+08
TkA06G011220 · 12 weeks old Non-exuding line · Group 78382.3e+08
TkA06G011220 · 24 weeks old Latex-exuding control · Group 78383.3e+08
TkA06G011220 · 24 weeks old Latex-exuding transgenic control · Group 78381.66e+08
TkA06G011220 · 24 weeks old Non-exuding line · Group 78382.44e+08
TkA06G011220 · 8 weeks old Latex-exuding control · Group 78372.11e+06
TkA06G011220 · 8 weeks old Latex-exuding transgenic control · Group 78371.51e+07
TkA06G011220 · 8 weeks old Non-exuding line · Group 78371.58e+07
TkA06G011220 · 12 weeks old Latex-exuding control · Group 78371.45e+07
TkA06G011220 · 12 weeks old Latex-exuding transgenic control · Group 78374.14e+06
TkA06G011220 · 12 weeks old Non-exuding line · Group 78373.42e+06
TkA06G011220 · 24 weeks old Latex-exuding control · Group 78371.21e+06
TkA06G011220 · 24 weeks old Latex-exuding transgenic control · Group 78371.96e+06
TkA06G011220 · 24 weeks old Non-exuding line · Group 78374.43e+06
TkA06G011220 · 8 weeks old Latex-exuding control · Group 8973.89e+08
TkA06G011220 · 8 weeks old Latex-exuding transgenic control · Group 8974.33e+08
TkA06G011220 · 8 weeks old Non-exuding line · Group 8971.25e+09
TkA06G011220 · 12 weeks old Latex-exuding control · Group 8978.59e+08
TkA06G011220 · 12 weeks old Latex-exuding transgenic control · Group 8978.3e+08
TkA06G011220 · 12 weeks old Non-exuding line · Group 8977.63e+08
TkA06G011220 · 24 weeks old Latex-exuding control · Group 8976.15e+08
TkA06G011220 · 24 weeks old Latex-exuding transgenic control · Group 8976.7e+08
TkA06G011220 · 24 weeks old Non-exuding line · Group 8976.6e+08
TkA06G011220 · 8 weeks old Latex-exuding control · Group 82507.42e+07
TkA06G011220 · 8 weeks old Latex-exuding transgenic control · Group 82508.69e+07
TkA06G011220 · 8 weeks old Non-exuding line · Group 82503.89e+08
TkA06G011220 · 12 weeks old Latex-exuding control · Group 82501.7e+08
TkA06G011220 · 12 weeks old Latex-exuding transgenic control · Group 82505.35e+07
TkA06G011220 · 12 weeks old Non-exuding line · Group 82504.02e+08
TkA06G011220 · 24 weeks old Latex-exuding control · Group 82505.04e+07
TkA06G011220 · 24 weeks old Latex-exuding transgenic control · Group 82502.41e+07
TkA06G011220 · 24 weeks old Non-exuding line · Group 82505.37e+07
Gene / protein IDProtein groupTissue/sampleMaterial/groupSampling ageMean intensitySDSEnUnit
TkA06G0112207838Root tissue (whole-root protein extract)Latex-exuding control8 weeks old2.22115e+082.97905e+071.48953e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old2.6189e+082.32784e+071.16392e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Non-exuding line8 weeks old2.80645e+089.39887e+074.69943e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Latex-exuding control12 weeks old2.08134e+081.61197e+088.05984e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old2.5623e+081.08341e+085.41703e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Non-exuding line12 weeks old2.29886e+081.81192e+089.05958e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Latex-exuding control24 weeks old3.29562e+089.81196e+074.90598e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old1.66232e+087.53849e+073.76924e+074LFQ intensity
TkA06G0112207838Root tissue (whole-root protein extract)Non-exuding line24 weeks old2.44095e+087.39785e+073.69892e+074LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Latex-exuding control8 weeks old2.11228e+064.22455e+062.11228e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old1.51122e+071.59778e+077.9889e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Non-exuding line8 weeks old1.58333e+071.78083e+078.90414e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Latex-exuding control12 weeks old1.4525e+071.18949e+075.94745e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old4.13662e+065.19757e+062.59879e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Non-exuding line12 weeks old3.42125e+066.8425e+063.42125e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Latex-exuding control24 weeks old1.21065e+062.4213e+061.21065e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old1.9581e+063.9162e+061.9581e+064LFQ intensity
TkA06G0112207837Root tissue (whole-root protein extract)Non-exuding line24 weeks old4.43422e+065.98334e+062.99167e+064LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Latex-exuding control8 weeks old3.89278e+081.33664e+086.68321e+074LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old4.3273e+081.04548e+085.22738e+074LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Non-exuding line8 weeks old1.24588e+093.05753e+081.52877e+084LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Latex-exuding control12 weeks old8.58815e+089.66756e+084.83378e+084LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old8.30115e+086.2005e+083.10025e+084LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Non-exuding line12 weeks old7.63255e+083.80631e+081.90316e+084LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Latex-exuding control24 weeks old6.15455e+083.93472e+081.96736e+084LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old6.69825e+084.10611e+082.05305e+084LFQ intensity
TkA06G011220897Root tissue (whole-root protein extract)Non-exuding line24 weeks old6.59668e+082.8362e+081.4181e+084LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Latex-exuding control8 weeks old7.41608e+072.48975e+071.24487e+074LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old8.68618e+077.67578e+073.83789e+074LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Non-exuding line8 weeks old3.88935e+082.22598e+081.11299e+084LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Latex-exuding control12 weeks old1.70057e+081.26405e+086.32023e+074LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old5.3488e+073.32667e+071.66334e+074LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Non-exuding line12 weeks old4.01703e+083.71357e+081.85678e+084LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Latex-exuding control24 weeks old5.03835e+073.42247e+071.71124e+074LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old2.41388e+071.65352e+078.26758e+064LFQ intensity
TkA06G0112208250Root tissue (whole-root protein extract)Non-exuding line24 weeks old5.36798e+074.9045e+072.45225e+074LFQ intensity

Sample-Level Protein Abundance

Gene / protein IDProtein groupSampleTissue/sampleMaterial/groupSampling ageReplicateAbundanceUnitSource
TkA06G01122078388 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 1232230000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 2258050000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 3209300000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4188880000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1251570000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 2234140000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 3284420000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 4277430000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1348660000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 2142490000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 3328540000.0LFQ intensityPXD011773
TkA06G01122078388 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 4302890000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 118504000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 2392930000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 3147970000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 4273130000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 1313150000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 2158920000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 3380560000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 4172290000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1101020000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2272870000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 3468210000.0LFQ intensityPXD011773
TkA06G011220783812 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 477443000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 1330390000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 2241530000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 3280080000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4466250000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 190529000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 2228690000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 3233390000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 4112320000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 1336560000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 2175310000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 3270050000.0LFQ intensityPXD011773
TkA06G011220783824 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 4194460000.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 10.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 30.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 48449100.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 112027000.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 337672000.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 410750000.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 112371000.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 39629300.0LFQ intensityPXD011773
TkA06G01122078378 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 441333000.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 126737000.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 210128000.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 30.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 421235000.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 110783000.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 30.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 45763500.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 10.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 213685000.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 30.0LFQ intensityPXD011773
TkA06G011220783712 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 40.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 10.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 34842600.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 40.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 10.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 37832400.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 40.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 10.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 20.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 35076900.0LFQ intensityPXD011773
TkA06G011220783724 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 412660000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 1403470000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 2570200000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 3320260000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4263180000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1548330000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 2302070000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 3406780000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 4473740000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1843840000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 21174900000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 31451600000.0LFQ intensityPXD011773
TkA06G0112208978 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 41513200000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 1135740000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 2889360000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 3195060000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 42215100000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 11543500000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 2244950000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 3382710000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 41149300000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1664740000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2427880000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 31310600000.0LFQ intensityPXD011773
TkA06G01122089712 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 4649800000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 11145000000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 2223860000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 3649390000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4443570000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 1396960000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 2920790000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 3251750000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 41109800000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 11036700000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 2407440000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 3715080000.0LFQ intensityPXD011773
TkA06G01122089724 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 4479450000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 180905000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 275363000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 340345000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4100030000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1201840000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 254111000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 346750000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 444746000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1163640000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 2344010000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 3351760000.0LFQ intensityPXD011773
TkA06G01122082508 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 4696330000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 194743000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 242315000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 3219970000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 4323200000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 151964000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 231341000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 3101010000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 429637000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1795720000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2102770000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 3641030000.0LFQ intensityPXD011773
TkA06G011220825012 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 467293000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 135433000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 297640000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 317868000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 450593000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 128621000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 230483000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 337451000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 40.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 187436000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 210920000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 3104050000.0LFQ intensityPXD011773
TkA06G011220825024 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 412313000.0LFQ intensityPXD011773
Data source and protein identification

PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files

Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.

Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.

TkA06G011220

Protein group 7838 · Peptides: 13 · Unique peptides: 13 · Sequence coverage: 54.2%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg7087.9|evm.TU.utg7087.9|utg7087|GWHAAAA00014569.:28934-29311,

Protein group 7837 · Peptides: 5 · Unique peptides: 2 · Sequence coverage: 13.1%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg7087.7|evm.TU.utg7087.7|utg7087|GWHAAAA00014569.:17532-17548,

Protein group 897 · Peptides: 20 · Unique peptides: 10 · Sequence coverage: 44.8%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg12069.25|evm.TU.utg12069.25|utg12069|GWHAAAA00004672.:129201-129252,;evm.model.utg12069.22|evm.TU.utg12069.22|utg12069|GWHAAAA00004672.:119646-119659,

Protein group 8250 · Peptides: 7 · Unique peptides: 5 · Sequence coverage: 25.3%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg806.3|evm.TU.utg806.3|utg806|GWHAAAA00007530.:8966-8979,

Sample design and raw-file catalogue
ExperimentSampling ageMaterial/groupReplicateRaw files
PAP738 weeks oldLatex-exuding controlBiological replicate 13
PAP748 weeks oldLatex-exuding controlBiological replicate 23
PAP758 weeks oldLatex-exuding controlBiological replicate 33
PAP768 weeks oldLatex-exuding controlBiological replicate 43
PAP778 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP788 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP798 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP808 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP818 weeks oldNon-exuding lineBiological replicate 13
PAP828 weeks oldNon-exuding lineBiological replicate 23
PAP838 weeks oldNon-exuding lineBiological replicate 33
PAP848 weeks oldNon-exuding lineBiological replicate 43
PAP8512 weeks oldLatex-exuding controlBiological replicate 13
PAP8612 weeks oldLatex-exuding controlBiological replicate 23
PAP8712 weeks oldLatex-exuding controlBiological replicate 33
PAP8812 weeks oldLatex-exuding controlBiological replicate 43
PAP8912 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP9012 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP9112 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP9212 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP9312 weeks oldNon-exuding lineBiological replicate 13
PAP9412 weeks oldNon-exuding lineBiological replicate 23
PAP9512 weeks oldNon-exuding lineBiological replicate 33
PAP9612 weeks oldNon-exuding lineBiological replicate 43
PAP9724 weeks oldLatex-exuding controlBiological replicate 13
PAP9824 weeks oldLatex-exuding controlBiological replicate 23
PAP9924 weeks oldLatex-exuding controlBiological replicate 33
PAP10024 weeks oldLatex-exuding controlBiological replicate 43
PAP10124 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP10224 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP10324 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP10424 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP10524 weeks oldNon-exuding lineBiological replicate 13
PAP10624 weeks oldNon-exuding lineBiological replicate 23
PAP10724 weeks oldNon-exuding lineBiological replicate 33
PAP10824 weeks oldNon-exuding lineBiological replicate 43