Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA04G270680 | TkA04G270680 | LXL04_037311 | 4512, 3681 | 72 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.24115e+09 | 3.35027e+08 | 1.67514e+08 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 2.02735e+09 | 1.94635e+08 | 9.73174e+07 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.47692e+09 | 2.64315e+08 | 1.32157e+08 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.96235e+09 | 1.39569e+08 | 6.97844e+07 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.19542e+09 | 1.9799e+08 | 9.89951e+07 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.1451e+09 | 2.1406e+08 | 1.0703e+08 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.4053e+09 | 2.50131e+08 | 1.25066e+08 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.5143e+09 | 4.75232e+08 | 2.37616e+08 | 4 | LFQ intensity |
TkA04G270680 | 4512 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 2.6671e+09 | 4.66084e+08 | 2.33042e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 6.70248e+09 | 5.01911e+08 | 2.50955e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 7.17735e+09 | 4.94455e+08 | 2.47228e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 6.14738e+09 | 9.54617e+08 | 4.77308e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 8.44522e+09 | 6.45573e+08 | 3.22786e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 8.41308e+09 | 2.68914e+08 | 1.34457e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 7.1321e+09 | 7.3154e+08 | 3.6577e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 8.9216e+09 | 1.38377e+09 | 6.91884e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.02436e+10 | 1.27838e+09 | 6.39192e+08 | 4 | LFQ intensity |
TkA04G270680 | 3681 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 9.05982e+09 | 1.53325e+09 | 7.66623e+08 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 1990800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 2496600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 1915500000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 2561700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 2091200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 1737600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 2133200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 2147400000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 2253200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 2833600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 2302100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 2518800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 1888100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 2030700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 2120600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 1810000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 2026200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 2025200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 2330700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 2399600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 2432600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 1914800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 2124700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 2108300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 2207300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 2753100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 2240100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 2420700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 2324800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 2145000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 2375900000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 3211500000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 3152900000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 2251900000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 2978800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 4512 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 2284800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 6624900000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 7347200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 6124600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 6713200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 7286300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 7015100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 7793000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 6615000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 6975100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 6734300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 4846900000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 6033200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 8259800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 8106400000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 9401500000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 8013200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 8477600000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 8092800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 8344100000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 8737800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 6964300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 7815200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 7573700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 6175200000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 7726800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 10892000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 8275300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 8792300000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 8370500000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 10527000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 10880000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 11197000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 9189700000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 7062800000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 10801000000.0 | LFQ intensity | PXD011773 |
TkA04G270680 | 3681 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 9185800000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA04G270680
Protein group 4512 · Peptides: 16 · Unique peptides: 16 · Sequence coverage: 26.4%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg24963.4|evm.TU.utg24963.4|utg24963|GWHAAAA00001825.:13989-14076,;evm.model.utg13313.2|evm.TU.utg13313.2|utg13313|GWHAAAA00024597.:9778-10085,
Protein group 3681 · Peptides: 18 · Unique peptides: 18 · Sequence coverage: 31.4%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg20865.5|evm.TU.utg20865.5|utg20865|GWHAAAA00013439.:22231-22523,;evm.model.utg22673.5|evm.TU.utg22673.5|utg22673|GWHAAAA00022739.:19167-19269,;evm.model.utg28515.6|evm.TU.utg28515.6|utg28515|GWHAAAA00011735.:15508-15569,;evm.model.utg14101.11|evm.TU.utg14101.11|utg14101|GWHAAAA00022579.:54052-54211,;evm.model.utg3006.13|evm.TU.utg3006.13|utg3006|GWHAAAA00017781.:78155-78462,;evm.model.utg4661.2|evm.TU.utg4661.2|utg4661|GWHAAAA00016060.:8265-8535,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |