Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA04G084480 | TkA04G084480 | LXL04_036010 | 3164, 3163, 3014 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.18716e+08 | 1.63201e+07 | 8.16006e+06 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.40616e+08 | 6.16232e+07 | 3.08116e+07 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 9.68838e+07 | 2.53583e+07 | 1.26792e+07 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 9.1973e+07 | 2.63772e+07 | 1.31886e+07 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 9.1963e+07 | 4.17627e+07 | 2.08813e+07 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 8.38355e+07 | 3.23647e+07 | 1.61823e+07 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 8.4972e+07 | 5.18358e+07 | 2.59179e+07 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 8.5756e+07 | 1.95691e+07 | 9.78453e+06 | 4 | LFQ intensity |
TkA04G084480 | 3164 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.24656e+08 | 4.84098e+07 | 2.42049e+07 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 9.93695e+07 | 2.82787e+07 | 1.41393e+07 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 9.06772e+07 | 2.89426e+07 | 1.44713e+07 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 4.5937e+07 | 5.05697e+07 | 2.52849e+07 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 3.68528e+07 | 1.2041e+07 | 6.02051e+06 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 3.0616e+07 | 2.28512e+07 | 1.14256e+07 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 4.46038e+07 | 8.63385e+06 | 4.31692e+06 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 4.90372e+07 | 2.41045e+07 | 1.20523e+07 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 3.64122e+07 | 1.79818e+06 | 899089 | 4 | LFQ intensity |
TkA04G084480 | 3163 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 2.5237e+07 | 1.85822e+07 | 9.29109e+06 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.65017e+08 | 6.425e+07 | 3.2125e+07 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.49142e+08 | 3.56226e+07 | 1.78113e+07 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 4.11788e+07 | 4.5101e+07 | 2.25505e+07 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.11005e+07 | 1.33898e+07 | 6.69488e+06 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 3.38585e+07 | 2.78215e+07 | 1.39108e+07 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.36895e+07 | 1.59605e+07 | 7.98024e+06 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.82238e+07 | 2.32366e+07 | 1.16183e+07 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 9.16125e+06 | 1.83225e+07 | 9.16125e+06 | 4 | LFQ intensity |
TkA04G084480 | 3014 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.67018e+07 | 3.34035e+07 | 1.67018e+07 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 98233000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 125340000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 114700000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 136590000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 64942000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 129170000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 213670000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 154680000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 69370000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 86055000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 128700000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 103410000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 81071000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 88681000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 68600000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 129540000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 154480000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 69874000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 74819000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 68679000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 86593000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 126690000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 49670000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 72389000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 55635000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 131520000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 125790000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 26943000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 94057000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 56820000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 92217000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 99930000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 191640000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 90941000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 128680000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3164 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 87363000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 63769000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 126760000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 116660000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 90289000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 91532000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 75854000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 64533000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 130790000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 18319000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 115070000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 50359000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 39549000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 21528000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 35647000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 50687000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 45561000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 50348000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 26555000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 37298000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 37022000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 51059000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 53036000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 31254000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 84175000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 35800000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 44920000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 37745000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 36227000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 37740000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 33937000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 32339000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 24710000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3163 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 43899000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 71419000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 176900000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 197400000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 214350000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 113790000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 136230000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 148520000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 198030000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 22935000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 20703000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 108500000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 12577000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 26943000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 17459000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 39516000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 67273000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 28645000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 24677000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 30081000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 48518000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 24377000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 36645000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 66807000.0 | LFQ intensity | PXD011773 |
TkA04G084480 | 3014 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA04G084480
Protein group 3164 · Peptides: 13 · Unique peptides: 3 · Sequence coverage: 25.5%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg1902.6|evm.TU.utg1902.6|utg1902|GWHAAAA00009555.:45128-45344,;evm.model.utg20825.11|evm.TU.utg20825.11|utg20825|GWHAAAA00015757.:42494-42729,
Protein group 3163 · Peptides: 12 · Unique peptides: 2 · Sequence coverage: 23.9%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg1902.5|evm.TU.utg1902.5|utg1902|GWHAAAA00009555.:21945-22161,;evm.model.utg1902.24|evm.TU.utg1902.24|utg1902|GWHAAAA00009555.:145203-146690:-|Frame:;evm.model.utg12363.10|evm.TU.utg12363.10|utg12363|GWHAAAA00025909.:36662-37966:-|Frame:
Protein group 3014 · Peptides: 11 · Unique peptides: 3 · Sequence coverage: 23.9%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg18503.4|evm.TU.utg18503.4|utg18503|GWHAAAA00011422.:18251-19708:+|Frame:;evm.model.utg18349.1|evm.TU.utg18349.1|utg18349|GWHAAAA00001597.:1138-2454:-|Frame:
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |