Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA03G024660 | TkA03G024660 | LXL04_006274 | 8923, 1223, 1815 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 9.41378e+07 | 4.71272e+07 | 2.35636e+07 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 9.23922e+07 | 3.47522e+07 | 1.73761e+07 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 3.71278e+07 | 7.49074e+06 | 3.74537e+06 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 9.9406e+07 | 3.84542e+07 | 1.92271e+07 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.48248e+08 | 7.76701e+07 | 3.88351e+07 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 5.86462e+07 | 1.25054e+07 | 6.2527e+06 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 9.35958e+07 | 1.71296e+07 | 8.56481e+06 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.26672e+08 | 3.11013e+07 | 1.55506e+07 | 4 | LFQ intensity |
TkA03G024660 | 8923 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 7.37895e+07 | 1.91293e+07 | 9.56466e+06 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.10402e+08 | 2.70822e+07 | 1.35411e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.97395e+08 | 9.29906e+07 | 4.64953e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.65625e+08 | 9.24242e+07 | 4.62121e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.81592e+08 | 4.73616e+07 | 2.36808e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.72748e+08 | 3.62473e+07 | 1.81237e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.91375e+08 | 2.37405e+07 | 1.18703e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.92172e+08 | 1.69458e+07 | 8.47292e+06 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.4957e+08 | 3.76226e+07 | 1.88113e+07 | 4 | LFQ intensity |
TkA03G024660 | 1223 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.78608e+08 | 1.38079e+07 | 6.90395e+06 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.95288e+08 | 2.63817e+07 | 1.31909e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.2069e+08 | 7.68472e+07 | 3.84236e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 3.26838e+08 | 3.91757e+07 | 1.95879e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 3.3143e+08 | 5.88304e+07 | 2.94152e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 3.14318e+08 | 9.02962e+07 | 4.51481e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.35578e+08 | 5.12438e+07 | 2.56219e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 8.19202e+07 | 7.56965e+07 | 3.78483e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.59476e+08 | 6.93569e+07 | 3.46784e+07 | 4 | LFQ intensity |
TkA03G024660 | 1815 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.28026e+08 | 7.92993e+07 | 3.96497e+07 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 69531000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 121400000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 144340000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 41280000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 95906000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 90092000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 134240000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 49331000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 32518000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 34899000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 48252000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 32842000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 53428000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 112480000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 87486000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 144230000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 103420000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 122550000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 263950000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 103070000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 57196000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 63919000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 71431000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 42039000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 86123000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 78819000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 118110000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 91331000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 172640000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 104910000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 117910000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 111230000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 68760000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 100580000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 70590000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 8923 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 55228000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 220210000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 177230000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 202970000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 241200000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 148270000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 133910000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 334810000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 172590000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 173050000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 200380000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 357690000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 331380000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 166050000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 250310000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 168270000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 141740000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 161690000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 167330000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 138240000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 223730000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 215440000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 180940000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 205890000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 163230000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 199120000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 168920000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 191970000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 208680000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 159470000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 128650000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 112360000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 197800000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 177160000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 160280000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 184110000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1223 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 192880000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 334580000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 284330000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 284480000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 277760000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 373980000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 352770000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 431360000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 524650000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 333150000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 359970000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 343780000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 270450000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 350720000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 244390000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 356940000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 373670000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 411710000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 349470000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 198270000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 297820000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 283400000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 190240000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 192310000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 276360000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 41462000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 47180000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 195410000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 43629000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 124830000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 78625000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 220690000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 213760000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 79107000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 172420000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 45169000.0 | LFQ intensity | PXD011773 |
TkA03G024660 | 1815 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 215410000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA03G024660
Protein group 8923 · Peptides: 18 · Unique peptides: 13 · Sequence coverage: 18.6%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg9615.1|evm.TU.utg9615.1|utg9615|GWHAAAA00025067.:9428-9679,
Protein group 1223 · Peptides: 27 · Unique peptides: 22 · Sequence coverage: 26.9%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg1301.20|evm.TU.utg1301.20|utg1301|GWHAAAA00004577.:86613-86966,
Protein group 1815 · Peptides: 24 · Unique peptides: 13 · Sequence coverage: 21.2%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg14596.1|evm.TU.utg14596.1|utg14596|GWHAAAA00020646.:5081-6361,;evm.model.utg11318.2|evm.TU.utg11318.2|utg11318|GWHAAAA00012713.:3931-4092,;evm.model.utg4251.4|evm.TU.utg4251.4|utg4251|GWHAAAA00013286.:39104-39507,;evm.model.utg4251.12|evm.TU.utg4251.12|utg4251|GWHAAAA00013286.:95106-95321,;evm.model.utg4842.27|evm.TU.utg4842.27|utg4842|GWHAAAA00004442.:128312-128509,;evm.model.utg22679.3|evm.TU.utg22679.3|utg22679|GWHAAAA00022426.:8120-9594,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |