Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G617870 | TkA01G617870 | LXL04_000344 | 1896, 5630 | 72 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 5.73015e+09 | 6.76232e+08 | 3.38116e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.97235e+09 | 1.2223e+09 | 6.11149e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.10772e+09 | 5.06028e+08 | 2.53014e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.92048e+09 | 5.40155e+08 | 2.70078e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 3.4945e+09 | 3.50814e+08 | 1.75407e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.926e+09 | 5.03102e+08 | 2.51551e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.52655e+09 | 8.03042e+08 | 4.01521e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.78975e+09 | 3.85974e+08 | 1.92987e+08 | 4 | LFQ intensity |
TkA01G617870 | 1896 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.73245e+09 | 3.70455e+08 | 1.85227e+08 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.49866e+08 | 1.22294e+08 | 6.11469e+07 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.62712e+08 | 1.02113e+08 | 5.10565e+07 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 5.16858e+08 | 1.47424e+08 | 7.37122e+07 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.30162e+08 | 1.18821e+08 | 5.94107e+07 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.33692e+08 | 1.93983e+08 | 9.69916e+07 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 3.25802e+08 | 2.52241e+08 | 1.26121e+08 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.22252e+07 | 1.46871e+07 | 7.34357e+06 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.52196e+07 | 2.11949e+07 | 1.05974e+07 | 4 | LFQ intensity |
TkA01G617870 | 5630 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 3.89014e+07 | 4.33833e+07 | 2.16916e+07 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 6358500000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 5790900000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 5992200000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 4779000000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 4339400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 4418100000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 4327100000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 6804800000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 2497200000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 1851700000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 1520400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 2561600000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 2833400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 3583400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 2994800000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 2270300000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 3679300000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 3371400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 3862400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 3064900000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 2522900000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 2082300000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 1331500000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 1767300000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 2272400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 1624100000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 3544600000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 2665100000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 2871400000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 3302600000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 2476200000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 2508800000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 1251900000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 1631000000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 1999700000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 1896 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 2047200000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 44757000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 319270000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 156800000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 78637000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 95931000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 73405000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 298480000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 183030000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 587220000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 357390000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 437210000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 685610000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 108700000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 9168800.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 293880000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 108900000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 119410000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 225940000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 509560000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 79858000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 271120000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 201190000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 135910000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 694990000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 33069000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 11527000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 4305000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 6607600.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 7668900.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 46602000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 95802000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 49669000.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 6333200.0 | LFQ intensity | PXD011773 |
TkA01G617870 | 5630 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 3801200.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G617870
Protein group 1896 · Peptides: 23 · Unique peptides: 1 · Sequence coverage: 70.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg14861.3|evm.TU.utg14861.3|utg14861|GWHAAAA00030445.:11807-12793:-|Frame:;evm.model.utg7299.16|evm.TU.utg7299.16|utg7299|GWHAAAA00019992.:74113-74295,;evm.model.utg5105.5|evm.TU.utg5105.5|utg5105|GWHAAAA00015862.:17290-18324:-|Frame:;evm.model.utg3217.5|evm.TU.utg3217.5|utg3217|GWHAAAA00004966.:31697-32737:-|Frame:;evm.model.utg3955.9|evm.TU.utg3955.9|utg3955|GWHAAAA00004586.:72674-73741:+|Frame:
Protein group 5630 · Peptides: 14 · Unique peptides: 14 · Sequence coverage: 47.7%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg3955.12|evm.TU.utg3955.12|utg3955|GWHAAAA00004586.:100254-101306:+|Frame:;evm.model.utg3217.3|evm.TU.utg3217.3|utg3217|GWHAAAA00004966.:12227-13279:-|Frame:
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |