Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G602990 | TkA01G602990 | LXL04_000551 | 1036, 1037, 7078 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.1674e+07 | 1.55365e+07 | 7.76825e+06 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.33448e+07 | 3.948e+07 | 1.974e+07 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 9.1711e+06 | 1.29572e+07 | 6.47862e+06 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.43145e+08 | 1.26623e+08 | 6.33114e+07 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 8.3773e+07 | 6.24985e+07 | 3.12492e+07 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 3.54212e+07 | 7.68528e+06 | 3.84264e+06 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 6.46515e+08 | 1.47667e+08 | 7.38333e+07 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 4.84535e+08 | 9.32698e+07 | 4.66349e+07 | 4 | LFQ intensity |
TkA01G602990 | 1036 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 5.6812e+08 | 2.03079e+08 | 1.01539e+08 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 830750 | 1.6615e+06 | 830750 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 9.31028e+06 | 4.43313e+06 | 2.21657e+06 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 7.21852e+06 | 2.18263e+06 | 1.09132e+06 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.94342e+06 | 2.53839e+06 | 1.2692e+06 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.7202e+07 | 1.06943e+07 | 5.34717e+06 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 3.86848e+07 | 1.34992e+07 | 6.7496e+06 | 4 | LFQ intensity |
TkA01G602990 | 1037 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 7.19622e+07 | 3.1926e+07 | 1.5963e+07 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.7075e+06 | 5.415e+06 | 2.7075e+06 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.114e+06 | 4.228e+06 | 2.114e+06 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.43088e+06 | 2.98699e+06 | 1.4935e+06 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 4.1846e+06 | 1.84961e+06 | 924806 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.5246e+07 | 1.31236e+07 | 6.56181e+06 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 2.13134e+07 | 1.85915e+07 | 9.29577e+06 | 4 | LFQ intensity |
TkA01G602990 | 7078 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 6.62648e+07 | 2.91487e+07 | 1.45743e+07 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 39235000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 17115000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 2714100.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 27632000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 102170000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 28345000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 17542000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 25322000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 28082000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 1608000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 6994400.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 327140000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 90118000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 115460000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 39861000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 29412000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 73951000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 173340000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 58389000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 43403000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 24938000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 36195000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 37149000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 580690000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 857080000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 630140000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 518150000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 473850000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 393190000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 456700000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 614400000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 759340000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 456750000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 339030000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1036 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 717360000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 3323000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 5709700.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 15293000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 10038000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 6200400.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 4122600.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 9165200.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 8151600.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 7434700.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 5339900.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 2433800.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 21735000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 22405000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 43232000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 21436000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 32421000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 22867000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 47132000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 52319000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 47321000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 50757000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 73091000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 1037 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 116680000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 10830000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 8456000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 3610800.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 6112700.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 4693000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 6583600.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 2838200.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 2623600.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 8594700.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 6874100.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 34789000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 10726000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 8126600.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 6161200.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 24715000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 46251000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 32370000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 68907000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 60622000.0 | LFQ intensity | PXD011773 |
TkA01G602990 | 7078 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 103160000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G602990
Protein group 1036 · Peptides: 13 · Unique peptides: 2 · Sequence coverage: 71.6%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg1251.23|evm.TU.utg1251.23|utg1251|GWHAAAA00016784.:76104-76571:-|Frame:;evm.model.utg1251.21|evm.TU.utg1251.21|utg1251|GWHAAAA00016784.:70868-71335:-|Frame:
Protein group 1037 · Peptides: 10 · Unique peptides: 2 · Sequence coverage: 63.9%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg13493.3|evm.TU.utg13493.3|utg13493|GWHAAAA00022719.:14429-14896:+|Frame:;evm.model.utg1251.24|evm.TU.utg1251.24|utg1251|GWHAAAA00016784.:79742-80209:-|Frame:;evm.model.utg8580.10|evm.TU.utg8580.10|utg8580|GWHAAAA00004776.:51035-51354,
Protein group 7078 · Peptides: 11 · Unique peptides: 0 · Sequence coverage: 59.4%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg6921.14|evm.TU.utg6921.14|utg6921|GWHAAAA00006505.:36504-36971:+|Frame:;evm.model.utg5335.1|evm.TU.utg5335.1|utg5335|GWHAAAA00010919.:7055-7522:+|Frame:;evm.model.utg28401.3|evm.TU.utg28401.3|utg28401|GWHAAAA00008284.:8789-9256:+|Frame:
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |