Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G498590 | TkA01G498590 | LXL04_001918 | 3776, 8306, 242 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.2769e+08 | 4.63105e+07 | 2.31553e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.46364e+08 | 9.48766e+07 | 4.74383e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.83478e+08 | 8.94728e+07 | 4.47364e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.96718e+08 | 2.93707e+07 | 1.46854e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.15281e+08 | 3.69231e+07 | 1.84616e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.52855e+08 | 4.21824e+07 | 2.10912e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.06877e+08 | 1.71069e+07 | 8.55345e+06 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.1018e+08 | 3.17985e+07 | 1.58992e+07 | 4 | LFQ intensity |
TkA01G498590 | 3776 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.34274e+08 | 4.68655e+07 | 2.34327e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.3353e+09 | 1.10764e+08 | 5.53818e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.599e+09 | 3.17569e+08 | 1.58784e+08 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 1.67212e+09 | 1.01229e+08 | 5.06144e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.31748e+09 | 1.5651e+08 | 7.82552e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.17872e+09 | 1.78645e+08 | 8.93225e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.34505e+09 | 1.33069e+08 | 6.65345e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 9.81985e+08 | 1.03909e+08 | 5.19545e+07 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.09437e+09 | 3.44037e+08 | 1.72018e+08 | 4 | LFQ intensity |
TkA01G498590 | 8306 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.1886e+09 | 1.56709e+08 | 7.83546e+07 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 3.39932e+06 | 2.78531e+06 | 1.39266e+06 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.50695e+06 | 3.01085e+06 | 1.50543e+06 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 8.1097e+06 | 3.20913e+06 | 1.60456e+06 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.18235e+06 | 2.68776e+06 | 1.34388e+06 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.3994e+06 | 2.77065e+06 | 1.38533e+06 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 825675 | 1.65135e+06 | 825675 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G498590 | 242 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 112350000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 122910000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 192400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 83098000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 100240000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 87796000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 109360000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 288060000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 186340000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 239260000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 390450000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 317860000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 186160000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 223330000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 160060000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 217320000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 164840000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 107510000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 113100000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 75674000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 121590000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 163180000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 208240000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 118410000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 92033000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 110920000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 95206000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 129350000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 80642000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 87580000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 148310000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 124190000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 91571000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 159910000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 98295000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 3776 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 187320000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 1224000000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 1468600000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 1380900000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 1267700000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 1817500000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 1186800000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 1514000000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 1877700000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 1628900000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 1549400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 1759700000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 1750500000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 1319900000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 1110000000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 1488600000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 1351400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 1445300000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 1115400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 1079800000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 1074400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 1188000000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 1485100000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 1287600000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 1419500000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 847740000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 955400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 1081500000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 1043300000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 734270000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 1075200000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 1560700000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 1007300000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 1012600000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 1366600000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 1113400000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 8306 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 1261800000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 4820200.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 6356100.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 2421000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 6219800.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 6055200.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 5752800.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 5206100.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 5955500.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 12225000.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 9052200.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 3219800.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 5509600.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 4822300.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 4775300.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 3302700.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G498590 | 242 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G498590
Protein group 3776 · Peptides: 9 · Unique peptides: 2 · Sequence coverage: 72.5%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg21279.5|evm.TU.utg21279.5|utg21279|GWHAAAA00017300.:13413-13448,
Protein group 8306 · Peptides: 10 · Unique peptides: 3 · Sequence coverage: 79.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg8177.11|evm.TU.utg8177.11|utg8177|GWHAAAA00011409.:49792-49829,
Protein group 242 · Peptides: 2 · Unique peptides: 2 · Sequence coverage: 7.5%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg10581.27|evm.TU.utg10581.27|utg10581|GWHAAAA00002070.:143387-143400,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |