Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G478520 | TkA01G478520 | LXL04_002154 | 8516, 4576, 4286 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 3.1475e+07 | 1.2894e+07 | 6.44701e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 5.4228e+07 | 1.13422e+07 | 5.6711e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 7.05835e+07 | 8.20671e+07 | 4.10336e+07 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.50779e+07 | 1.89715e+07 | 9.48576e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.5905e+07 | 1.75191e+07 | 8.75954e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.22188e+07 | 4.10397e+06 | 2.05198e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 8.94492e+06 | 1.24882e+07 | 6.24412e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 6.83725e+06 | 1.36745e+07 | 6.83725e+06 | 4 | LFQ intensity |
TkA01G478520 | 8516 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.85205e+07 | 1.48825e+07 | 7.44123e+06 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4576 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 919400 | 1.8388e+06 | 919400 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.13535e+07 | 1.48743e+07 | 7.43715e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.3887e+07 | 1.3304e+07 | 6.65201e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.74598e+07 | 1.33919e+07 | 6.69596e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 6.297e+06 | 7.34346e+06 | 3.67173e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.15641e+07 | 4.04902e+06 | 2.02451e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 2.9455e+06 | 5.891e+06 | 2.9455e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 4.2945e+06 | 8.589e+06 | 4.2945e+06 | 4 | LFQ intensity |
TkA01G478520 | 4286 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 18096000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 48547000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 26350000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 32907000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 59387000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 42787000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 67584000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 47154000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 34252000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 193580000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 26382000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 28120000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 6695500.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 42729000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 10887000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 37645000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 35389000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 30586000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 20555000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 24498000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 26514000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 17308000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 26487000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 9292700.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 27349000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 21373000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 16593000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 8516 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 36116000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 3677600.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4576 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 31313000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 14101000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 29911000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 19107000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 6530000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 13121000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 44810000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 22289000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 29619000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 13853000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 11335000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 15297000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 11033000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 6100500.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 13826000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 11782000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 17178000.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G478520 | 4286 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G478520
Protein group 8516 · Peptides: 4 · Unique peptides: 1 · Sequence coverage: 16.4%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg8697.3|evm.TU.utg8697.3|utg8697|GWHAAAA00015793.:9606-10376:+|Frame:
Protein group 4576 · Peptides: 4 · Unique peptides: 1 · Sequence coverage: 16.4%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg25315.11|evm.TU.utg25315.11|utg25315|GWHAAAA00019487.:41229-41999:-|Frame:
Protein group 4286 · Peptides: 3 · Unique peptides: 3 · Sequence coverage: 23.3%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg7151.2|evm.TU.utg7151.2|utg7151|GWHAAAA00029819.:13736-14497:+|Frame:;evm.model.utg23726.4|evm.TU.utg23726.4|utg23726|GWHAAAA00017306.:16552-17313:-|Frame:;evm.model.utg13168.6|evm.TU.utg13168.6|utg13168|GWHAAAA00004731.:24206-24881,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |