Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G355850 | TkA01G355850 | LXL04_003467 | 6869, 8827, 865 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 5.0852e+08 | 7.16194e+07 | 3.58097e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 4.5914e+08 | 9.70627e+07 | 4.85314e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 5.2852e+08 | 1.28007e+08 | 6.40035e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 6.04482e+08 | 4.28494e+07 | 2.14247e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 6.31932e+08 | 1.56567e+08 | 7.82836e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 7.29798e+08 | 8.73013e+07 | 4.36507e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 6.93925e+08 | 5.99515e+07 | 2.99758e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 6.62418e+08 | 1.29927e+08 | 6.49634e+07 | 4 | LFQ intensity |
TkA01G355850 | 6869 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 5.41885e+08 | 6.1028e+07 | 3.0514e+07 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.84038e+09 | 2.15342e+08 | 1.07671e+08 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.73968e+09 | 2.51726e+08 | 1.25863e+08 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.15118e+09 | 3.14813e+08 | 1.57406e+08 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.21688e+09 | 8.99918e+07 | 4.49959e+07 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.13965e+09 | 2.39306e+08 | 1.19653e+08 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.23735e+09 | 1.4615e+08 | 7.3075e+07 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 8.83848e+08 | 7.45831e+07 | 3.72915e+07 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 8.3059e+08 | 1.02764e+08 | 5.13819e+07 | 4 | LFQ intensity |
TkA01G355850 | 8827 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 5.22652e+08 | 9.03786e+07 | 4.51893e+07 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.54768e+07 | 1.90562e+07 | 9.52812e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 3.18755e+07 | 1.72228e+07 | 8.61141e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 1.4933e+07 | 1.75125e+07 | 8.75623e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.48858e+07 | 1.72592e+07 | 8.62961e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.35338e+07 | 9.32785e+06 | 4.66393e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.43582e+07 | 9.84699e+06 | 4.9235e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 6.61325e+06 | 1.32265e+07 | 6.61325e+06 | 4 | LFQ intensity |
TkA01G355850 | 865 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.32846e+07 | 6.35328e+06 | 3.17664e+06 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 474270000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 576420000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 558920000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 424470000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 443040000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 452120000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 353040000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 588360000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 499270000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 436270000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 716570000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 461970000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 627490000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 643120000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 601820000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 545500000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 657690000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 479490000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 551030000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 839520000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 743100000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 602940000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 795160000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 777990000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 697930000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 730810000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 608020000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 738940000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 618010000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 576320000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 855620000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 599720000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 467710000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 615290000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 554160000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 6869 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 530380000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 1598000000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 1762500000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 2107800000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 1893200000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 1784000000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 2078300000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 1539800000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 1556600000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 1808300000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 2208300000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 2554500000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 2033600000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 1344200000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 1206400000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 1182400000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 1134500000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 1431200000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 938350000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 949260000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 1239800000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 1159800000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 1093000000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 1427700000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 1268900000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 914810000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 974880000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 823530000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 822170000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 844880000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 928030000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 863440000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 686010000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 565000000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 628810000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 433990000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 8827 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 462810000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 22851000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 39056000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 12142000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 26267000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 53146000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 35947000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 26119000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 33613000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 27861000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 31682000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 21326000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 15829000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 16980000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 21161000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 15910000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 20362000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 26453000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 6493400.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 21830000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 12860000.0 | LFQ intensity | PXD011773 |
TkA01G355850 | 865 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 11955000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G355850
Protein group 6869 · Peptides: 22 · Unique peptides: 11 · Sequence coverage: 57.5%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg4922.16|evm.TU.utg4922.16|utg4922|GWHAAAA00017931.:48158-48657,;evm.model.utg27081.3|evm.TU.utg27081.3|utg27081|GWHAAAA00015168.:4325-4824,
Protein group 8827 · Peptides: 32 · Unique peptides: 2 · Sequence coverage: 67.8%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg9333.5|evm.TU.utg9333.5|utg9333|GWHAAAA00004452.:32805-33301,
Protein group 865 · Peptides: 30 · Unique peptides: 3 · Sequence coverage: 65.0%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg12017.4|evm.TU.utg12017.4|utg12017|GWHAAAA00007777.:9102-9134,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |