Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA01G092650 | TkA01G092650 | LXL04_009597 | 4362, 2641, 2665 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.09532e+09 | 2.08981e+08 | 1.04491e+08 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 9.39595e+08 | 3.56009e+07 | 1.78005e+07 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 7.31662e+08 | 1.69336e+08 | 8.46679e+07 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.3161e+09 | 3.24382e+08 | 1.62191e+08 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.09336e+09 | 2.11185e+08 | 1.05592e+08 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.10532e+09 | 1.6792e+08 | 8.39599e+07 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.03259e+09 | 1.54826e+08 | 7.74128e+07 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.19817e+09 | 3.43633e+08 | 1.71816e+08 | 4 | LFQ intensity |
TkA01G092650 | 4362 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.03167e+09 | 4.09447e+08 | 2.04724e+08 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 2.72585e+08 | 3.8437e+07 | 1.92185e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 2.6019e+08 | 4.44055e+07 | 2.22028e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.5135e+08 | 4.25438e+07 | 2.12719e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.9757e+08 | 4.23127e+07 | 2.11564e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.92762e+08 | 4.74252e+07 | 2.37126e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 3.35672e+08 | 4.14284e+07 | 2.07142e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 3.16752e+08 | 5.498e+07 | 2.749e+07 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 4.01098e+08 | 1.72987e+07 | 8.64937e+06 | 4 | LFQ intensity |
TkA01G092650 | 2641 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 4.0506e+08 | 6.70914e+07 | 3.35457e+07 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.1986e+09 | 1.15164e+08 | 5.75822e+07 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.18035e+09 | 7.13566e+07 | 3.56783e+07 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 1.0615e+09 | 2.13381e+08 | 1.06691e+08 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.27412e+09 | 1.07126e+08 | 5.35629e+07 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 1.18142e+09 | 2.77308e+08 | 1.38654e+08 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.27995e+09 | 1.72566e+08 | 8.6283e+07 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.08314e+09 | 2.56729e+08 | 1.28364e+08 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 1.31259e+09 | 2.74465e+08 | 1.37233e+08 | 4 | LFQ intensity |
TkA01G092650 | 2665 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.50388e+09 | 2.81724e+08 | 1.40862e+08 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 900950000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 1221700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 1322900000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 935710000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 916880000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 947950000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 907320000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 986230000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 772420000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 721010000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 511920000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 921300000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 1619600000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 1016600000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 1055400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 1572800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 1059500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 1330500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 1158700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 824760000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 864570000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 1160700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 1141500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 1254500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 1029200000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 1133700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 1152400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 815050000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 1194500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 725280000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 1528800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 1344100000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 1585900000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 881700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 615570000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 4362 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 1043500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 265580000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 249390000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 246520000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 328850000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 277490000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 197660000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 264320000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 301290000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 246760000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 193030000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 286600000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 279010000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 250760000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 308950000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 350090000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 280480000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 352870000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 272000000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 242030000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 304150000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 317280000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 390100000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 342140000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 293170000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 252220000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 296800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 337350000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 380640000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 392330000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 389330000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 426720000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 396010000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 350420000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 417870000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 357130000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2641 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 494820000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 1177800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 1362800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 1159400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 1094400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 1256500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 1087400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 1170100000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 1207400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 971420000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 974690000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 920490000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 1379400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 1415400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 1203500000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 1179700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 1297900000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 1168900000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 1576800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 1011600000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 968400000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 1128900000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 1374800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 1475300000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 1140800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 1110900000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 1051700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 1398000000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 771960000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 1345700000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 941850000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 1604800000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 1358000000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 1475000000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 1571100000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 1144100000.0 | LFQ intensity | PXD011773 |
TkA01G092650 | 2665 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 1825300000.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA01G092650
Protein group 4362 · Peptides: 19 · Unique peptides: 17 · Sequence coverage: 55.2%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg2416.15|evm.TU.utg2416.15|utg2416|GWHAAAA00008798.:104416-104479,
Protein group 2641 · Peptides: 19 · Unique peptides: 17 · Sequence coverage: 45.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg17260.5|evm.TU.utg17260.5|utg17260|GWHAAAA00010019.:45130-45273,;evm.model.utg409.8|evm.TU.utg409.8|utg409|GWHAAAA00004644.:33847-33927,;evm.model.utg1005.1|evm.TU.utg1005.1|utg1005|GWHAAAA00029449.:18421-18486,;evm.model.utg13349.2|evm.TU.utg13349.2|utg13349|GWHAAAA00030128.:32910-32932,
Protein group 2665 · Peptides: 19 · Unique peptides: 19 · Sequence coverage: 73.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg3489.7|evm.TU.utg3489.7|utg3489|GWHAAAA00006275.:48122-49033,;evm.model.utg17373.1|evm.TU.utg17373.1|utg17373|GWHAAAA00021919.:11226-11399,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |