ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 6 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA03G423400
Chr03:105413074-105413532 (-)
GWHBCHF00000004
|
LXL04_021011
Chr04:118718185-118728043 (-)
CM104802.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
89.000 Q 83.553 / T 49.027 |
TkA03G423400 | |
|
TkA03G432910
Chr03:107694183-107694587 (+)
GWHBCHF00000004
|
LXL04_021011
Chr04:118718185-118728043 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
80.500 Q 91.791 / T 47.860 |
TkA03G432910 | |
|
TkA04G108590
Chr04:28217498-28217899 (+)
GWHBCHF00000005
|
LXL04_021011
Chr04:118718185-118728043 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
74.800 Q 83.459 / T 43.191 |
TkA04G108590 | |
|
TkA05G340300
Chr05:84293616-84293987 (-)
GWHBCHF00000006
|
LXL04_021011
Chr04:118718185-118728043 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
90.800 Q 96.748 / T 46.304 |
JCVI_TKOH_00241 | TkA05G340300 |
|
TkA06G137450
Chr06:35970581-35970964 (-)
GWHBCHF00000007
|
LXL04_021011
Chr04:118718185-118728043 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
82.000 Q 96.063 / T 47.471 |
TkA06G137450 | |
|
TkA07G158260
Chr07:40714040-40716091 (+)
GWHBCHF00000008
|
LXL04_021011
Chr04:118718185-118728043 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
90.100 Q 55.760 / T 47.082 |
TkA07G158260 |
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