ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 11 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA01G071450
Chr01:18330179-18331126 (-)
GWHBCHF00000002
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | Multiple TK1151 genes map to the same OH-1004 gene Complex |
71.600 Q 100.000 / T 100.000 |
JCVI_TKOH_00004 | TkA01G071450 |
|
TkA01G193600
Chr01:49512848-49514032 (+)
GWHBCHF00000002
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
62.800 Q 100.000 / T 100.000 |
TkA01G193600 | |
|
TkA01G462340
Chr01:115887458-115888370 (-)
GWHBCHF00000002
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | Multiple TK1151 genes map to the same OH-1004 gene Complex |
70.300 Q 100.000 / T 100.000 |
TkA01G462340 | |
|
TkA01G515510
Chr01:129185212-129186149 (-)
GWHBCHF00000002
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | Multiple TK1151 genes map to the same OH-1004 gene Complex |
73.500 Q 100.000 / T 100.000 |
TkA01G515510 | |
|
TkA01G604920
Chr01:152438624-152439949 (-)
GWHBCHF00000002
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
62.800 Q 100.000 / T 100.000 |
TkA01G604920 | |
|
TkA03G410390
Chr03:102075142-102076072 (+)
GWHBCHF00000004
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | Multiple TK1151 genes map to the same OH-1004 gene Complex |
71.600 Q 100.000 / T 100.000 |
TkA03G410390 | |
|
TkA04G022060
Chr04:5603899-5605077 (+)
GWHBCHF00000005
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
62.800 Q 100.000 / T 100.000 |
TkA04G022060 | |
|
TkA04G025920
Chr04:6789544-6790721 (+)
GWHBCHF00000005
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
62.800 Q 100.000 / T 100.000 |
TkA04G025920 | |
|
TkA06G074750
Chr06:19995527-19996309 (-)
GWHBCHF00000007
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
67.100 Q 100.000 / T 100.000 |
TkA06G074750 | |
|
TkA07G433490
Chr07:109681663-109682418 (-)
GWHBCHF00000008
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
65.200 Q 81.452 / T 90.323 |
TkA07G433490 | |
|
TkA08G065750
Chr08:16874483-16875629 (+)
GWHBCHF00000009
|
LXL04_005263
Chr01:159187451-159188398 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
62.200 Q 100.000 / T 100.000 |
TkA08G065750 |
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